Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5j02
(605 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 31 0.17
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 30 0.23
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.40
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 29 0.70
SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces po... 29 0.70
SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces ... 27 2.1
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 27 2.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 3.7
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 4.9
SPBC2A9.02 |||NAD dependent epimerase/dehydratase family protein... 25 6.5
SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces ... 25 6.5
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 25 6.5
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 6.5
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 25 6.5
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 25 8.6
SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1 |Schizosac... 25 8.6
SPAC140.01 |sdh2||succinate dehydrogenase |Schizosaccharomyces p... 25 8.6
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 8.6
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 30.7 bits (66), Expect = 0.17
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = -3
Query: 477 TTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVSVST---VAVLPSAVTETSAATDLT 307
TTAV E ++S +T +STV P + V + V+T V+ SA T T+++T
Sbjct: 1395 TTAVTETSSSGYYTTIVSSTVVSTVVPGSTVYPVTHVTTTTGVSGESSAFTYTTSSTQYE 1454
Query: 306 FLEGVTSSFQRLTVLVS 256
VT+S+ +V S
Sbjct: 1455 PSTVVTTSYYTTSVYTS 1471
Score = 27.5 bits (58), Expect = 1.6
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = -3
Query: 576 TVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAP 397
T G+ ++ T + + T + +E + + T A ++TT + +T A
Sbjct: 1319 TAGTETQVTTATEVQPTTGATGTAGTETQVTTGTETQATTATET-QATTATEVQTTTGAT 1377
Query: 396 ATLVDELVSVSTVAVLPS-AVTETSAA 319
T E + V P+ AVTETS++
Sbjct: 1378 GTAGTETQVTTATEVQPTTAVTETSSS 1404
Score = 27.1 bits (57), Expect = 2.1
Identities = 22/85 (25%), Positives = 37/85 (43%)
Frame = -3
Query: 531 EVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVSVSTVAV 352
EV T + + G + TTA E+ + + T +T+ +T+V +V STV
Sbjct: 1369 EVQTTTGATGTAGTETQVTTAT-EVQPTTAVTETSSSGYYTTIVSSTVVSTVVPGSTVYP 1427
Query: 351 LPSAVTETSAATDLTFLEGVTSSFQ 277
+ T T + + + TSS Q
Sbjct: 1428 VTHVTTTTGVSGESSAFTYTTSSTQ 1452
Score = 25.8 bits (54), Expect = 4.9
Identities = 21/102 (20%), Positives = 37/102 (36%)
Frame = -3
Query: 600 SSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPL 421
+S +++ T G++ T+ + + LP+ G A T A+ ++ TTG
Sbjct: 1117 TSTVTVTPT-GTATGTTTVVINTPTTTGSEVLPTTGATGTAGTETQLTTATEVQPTTGAT 1175
Query: 420 LDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEG 295
T T E + + + TE T T G
Sbjct: 1176 GTAGTETQVTTGTETQATTATETQATTATEVQTTTGATGTAG 1217
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 419 SKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVT 553
S VVD T AA S++ + + + SE S+ TSS++A T
Sbjct: 109 SSSAVVDSATSAAASSSVIPTSSSVVASSSEVASSTTSSAAASAT 153
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.5 bits (63), Expect = 0.40
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 446 TDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTV 577
TD+ STTA+ ++ S S S +S+ TS S++I S P V
Sbjct: 862 TDSVTSTTALTSQGPSSSVVSSSLSSTTSLSTSIPVTSSVAPAV 905
Score = 27.5 bits (58), Expect = 1.6
Identities = 25/117 (21%), Positives = 43/117 (36%)
Frame = +2
Query: 203 VDSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVTADGNXXXXXXXXXX 382
V S SET+ S T+ S W + + S SVAA V+ T+ +
Sbjct: 905 VTSTGSETSSVVGSGTDSATS--SSWTAETSSSAITSSVAASVTPTSSSSASSWSSSSEV 962
Query: 383 XXXXXXXXXXISSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVT 553
S+ ++ ++ S+ A + S + S SS+S++ T
Sbjct: 963 DPSTAASATGSSTSSIATASVSGSSTSSVATASATDSSTSSIAAASVTGSSTSSVAT 1019
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +2
Query: 416 SSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPT 574
SS+G ++ + A++ T+ ++ +S S S +S + + VT SDEPT
Sbjct: 337 SSQG--LESTSSIALNPTSSISSTSSSSSTSSAISTISQDHTKTVTSVSDEPT 387
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 28.7 bits (61), Expect = 0.70
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -3
Query: 537 EDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVAP-ATLVDE 379
EDEV+ E P+E AS ++T VE AA+ + T T AP A L DE
Sbjct: 94 EDEVADE----PAEAPASTSSTPKVETAAAAAPAATPAPAPAQTSAPAAALPDE 143
>SPBC1709.13c |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 547
Score = 28.7 bits (61), Expect = 0.70
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 206 DSEASETALPASDAEKSETNTVSLWNDDVTPSKNVKSVAADVSVTADGN 352
DSE++ LP D+ + LWN D K+V+ ++ + + A GN
Sbjct: 182 DSESTPILLPLIDSLNHKPKQPILWNSDFQDEKSVQLISQE--LVAKGN 228
>SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 263
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 488 ASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGKLINE 598
+S ++ Y+S D+SS A V + S+ PTV +NE
Sbjct: 221 SSLNDLKRYIS-DSSSELADVVLSSESPTVQAATVNE 256
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 26.6 bits (56), Expect = 2.8
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = -3
Query: 573 VGSSDRIVTIADEDEVSAETYSLPSEGEAS--FATTAVVEIA-ASVIKSTTGPL-LDIST 406
+ +DRI+ I EDE+ LPSE + F+ T ++ + I GPL +++ +
Sbjct: 242 IDEADRILEIGFEDEMRQIMKILPSENRQTLLFSATQTTKVEDLARISLKPGPLYVNVDS 301
Query: 405 VAPATLVDEL 376
P + V+ L
Sbjct: 302 GKPTSTVEGL 311
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 3.7
Identities = 24/106 (22%), Positives = 47/106 (44%)
Frame = -3
Query: 600 SSLISLPSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPL 421
+S S+P T S++R T + + S + SFA+ + + S+T
Sbjct: 634 TSSTSIPLT--STNRTSTTFTSSTSISTSSSSTATSSTSFASESSSFYSNVTTSSSTVST 691
Query: 420 LDISTVAPATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSS 283
+T P+T ++ S+++ +P+ TE A+ + E T+S
Sbjct: 692 PPPTTSFPSTFTTSFITSSSLSSIPNNSTEVKTASTSSGTEIKTAS 737
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.8 bits (54), Expect = 4.9
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +2
Query: 413 ISSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSA 544
++ G + ++ +++S+T + +SPS S + SSSS+
Sbjct: 117 LTGNGVLQTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSS 160
>SPBC2A9.02 |||NAD dependent epimerase/dehydratase family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 295
Score = 25.4 bits (53), Expect = 6.5
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = -3
Query: 492 EASFATTAVVEIAASVIKSTTGPLLDISTVAPATLVDELVSVSTVAVLPSAVTETSAATD 313
EA V+E V++ T PL+ S A + +L + + P + T
Sbjct: 82 EACKLDARVIEAIGEVLRGTERPLITTSVTAVLSSNGKLGTEISEVPQPPIPRQLGEVTT 141
Query: 312 LTFL-EGVTSSFQRL 271
L F +GV +S RL
Sbjct: 142 LKFASQGVRASILRL 156
>SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 406 SRNIK*RPSRGFDHRCCNFNYSSSSKR 486
S +I + SR F H NFN+S+ +KR
Sbjct: 217 SADIPAKSSRLFPHGIYNFNFSAPNKR 243
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 443 ITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDE 568
+TD I T + V+ + +GS V + S S I + SDE
Sbjct: 1 MTDLEIETVSRVSSNPDEVKGSSVVEEEPDSESTIKSRVSDE 42
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 416 SSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEPTVDGK 586
++KG ++ AA S++AVV+ S + S +S++S+ + +V GK
Sbjct: 240 ANKGVSTPAVSSAAASSSAVVSSVVSSATSVAASSTISSATSSSASASPTSSSVSGK 296
Score = 25.0 bits (52), Expect = 8.6
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = -3
Query: 549 TIADEDEVSA-ETYSLPSEGEASFATTAVVEIA--ASVIKSTTGPLLDISTVAPATLVDE 379
++A E+SA S +S A ++VV A ++ K + P + + + + +V
Sbjct: 203 SVASSSEISAGSATSYVPTSSSSIALSSVVASASVSAANKGVSTPAVSSAAASSSAVVSS 262
Query: 378 LVSVSTVAVLPSAVTETSAAT 316
+VS +T S ++ ++++
Sbjct: 263 VVSSATSVAASSTISSATSSS 283
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 25.4 bits (53), Expect = 6.5
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 419 SKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIRSDEP 571
+KG + L T+ +TT S S S SA +SSSS+ +P
Sbjct: 281 TKGVMEALSTNDTTNTTDDATNTTSDSSSSSSASASSSSSSSSAASLVSQP 331
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.0 bits (52), Expect = 8.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 600 SSLISLPS-TVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAAS 448
SS ++PS TV SSD++ + ET S PS+ +S T V ++ S
Sbjct: 572 SSPFNVPSFTVSSSDQVQKKKGNVPNAIETDSSPSDTISSSPTVRAVNLSPS 623
>SPAC26A3.01 |sxa1|SPAC2E1P5.06|aspartic protease Sxa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 533
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 459 IAASVIKSTTGPLLDISTVA--PATLVDELVSVSTV 358
I SV + TG D VA P T+VD+LVS + +
Sbjct: 209 IGLSVAMTITGISSDDKVVAFTPPTIVDQLVSANVI 244
>SPAC140.01 |sdh2||succinate dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 252
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +2
Query: 44 YLVQAALNALTGFYAKPKSSEGWI-NDVIP 130
++V+ + LT FY + KS E W+ ND IP
Sbjct: 115 FIVKDLVPDLTYFYKQYKSIEPWLQNDNIP 144
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 416 SSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTI 556
++K VVD + A S+++ A S +E S S TSSS+ + +I
Sbjct: 328 TAKIVVVDYSEEMASSSSSASATATSSAESSIATSPITSSSNVVSSI 374
Score = 25.0 bits (52), Expect = 8.6
Identities = 18/101 (17%), Positives = 43/101 (42%)
Frame = -3
Query: 582 PSTVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTV 403
P+T +S+ ++ + + S G+AS T I+ S T+G + ++
Sbjct: 709 PTTTITSEVSSILSSPTSMQSSVSRPQSSGDASGFNTIFTSISQSSDGETSGYTISSNSS 768
Query: 402 APATLVDELVSVSTVAVLPSAVTETSAATDLTFLEGVTSSF 280
+ + S+ + +T++S +T ++ + SS+
Sbjct: 769 QNSASEPQTAFTSSSSSATPTITQSSISTSVSSQSSMNSSY 809
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,822,773
Number of Sequences: 5004
Number of extensions: 28814
Number of successful extensions: 148
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 266270664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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