Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5j02
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    27   0.47 
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           27   0.62 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   4.4  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = -3

Query: 579 STVGSSDRIVTIADEDEVSAETYSLPSEGEASFATTAVVEIAASVIKSTTGPLLDISTVA 400
           S   ++D +V+  D     A + ++P+      A  A   +AA+   +T      ++T A
Sbjct: 160 SIAPTTDAVVSAHDRRFDDASSPAVPA------APVATAALAATAFAATNAA--SVATAA 211

Query: 399 PATLVDELVSVSTVAVLPSAVTETSA 322
           PA +     + ++ A  P+A T  +A
Sbjct: 212 PAAITAPAANAASTAAAPAAATAHAA 237


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 26.6 bits (56), Expect = 0.62
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = -3

Query: 501 SEGEASFATTAVVEIAASVIKSTTGPL-LDISTVAPATLVDELVSVSTVAVLPSAVTETS 325
           + G+    TT V     +V  +TT       +TVAP T        +T   + S    T+
Sbjct: 18  TSGQIDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTT 77

Query: 324 AATDLT 307
            +TD T
Sbjct: 78  GSTDTT 83


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 144 QHHHHGMLQHQNLTHRSRL 200
           QHHHH + Q Q +  ++ L
Sbjct: 784 QHHHHHLQQQQQIVGKNTL 802


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 455  AISTTAVVAKDASPSEGSEYVSADTSSSS 541
            A+ TTA V   A+ S G  YVS  +++ S
Sbjct: 2750 AVGTTAAVGITAATSVGFAYVSTASATKS 2778


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +2

Query: 413 ISSKGPVVDLITDAAISTTAVVAKDASPSEGSEYVSADTSSSSAIVTIR 559
           ISS GPV   +  +++S ++  +  ASP +   +   D   S  ++T++
Sbjct: 580 ISSSGPVNRRVQGSSVSPSSFPSPQASPQD-DRHRELDDLLSDMMLTVQ 627


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,156
Number of Sequences: 2352
Number of extensions: 6855
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)