Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5i24
(680 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0362 + 17211788-17212300,17213342-17213623,17214071-17214139 148 5e-36
01_05_0697 + 24372233-24372328,24372523-24372554,24372871-243729... 109 3e-24
08_01_0045 + 322679-323347 29 3.4
01_06_1164 - 35026345-35026954,35027853-35027939,35028120-350284... 29 3.4
09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539 29 4.5
02_03_0116 - 15440263-15441024,15441097-15443451 28 6.0
09_02_0327 - 7284829-7284889,7284946-7286126 28 7.9
08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099 28 7.9
07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206 28 7.9
06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776 28 7.9
04_04_1405 - 33305948-33309676,33309749-33310468,33310533-333114... 28 7.9
04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376 28 7.9
04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220 28 7.9
03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235 28 7.9
02_03_0347 - 17999780-18000592,18000656-18003019 28 7.9
01_06_0717 - 31446860-31447074,31447183-31447270,31448909-314490... 28 7.9
01_05_0449 - 22349299-22349310,22349842-22350011,22350232-223503... 28 7.9
>10_08_0362 + 17211788-17212300,17213342-17213623,17214071-17214139
Length = 287
Score = 148 bits (358), Expect = 5e-36
Identities = 78/181 (43%), Positives = 115/181 (63%), Gaps = 19/181 (10%)
Frame = +3
Query: 84 DTYESVILVKNEVFVFKIPPRTSNRGYRAADWNLQEPQWTGRMRLVSKGNELVMKLEDKT 263
+ +E +LV EV V+KIPPRT++ GY+ +W + W+GR+R+VS G+ ++LED
Sbjct: 10 EAFEHTLLVVREVSVYKIPPRTTSGGYKCGEWLQSDRIWSGRLRVVSCGDRCEIRLEDPA 69
Query: 264 SGELFAKCPIDKYPG---VALEAVTDSSRYFVVKIQDDNGCAAYIGLGFGDRSDSFDLNV 434
SG+LFA C + PG A+E V DSSRYFV++I+D G A++GLGFG+R+++FD NV
Sbjct: 70 SGDLFAACFV--LPGQREAAVETVLDSSRYFVLRIEDGRGKHAFVGLGFGERNEAFDFNV 127
Query: 435 ALQDHFKWLKKEQE----------SDQTPQGQLDL------GFKDGETIKINMKITKKDG 566
AL DH K++K+E E ++ GQ+D+ K+GETI+IN+K G
Sbjct: 128 ALSDHEKYVKREHEKEAADGGAGGGEENDDGQIDIHPAVNRRLKEGETIRINVKNKPSTG 187
Query: 567 S 569
S
Sbjct: 188 S 188
>01_05_0697 +
24372233-24372328,24372523-24372554,24372871-24372971,
24373050-24373122,24373267-24373298,24373482-24373651,
24374029-24374127,24375460-24375855
Length = 332
Score = 109 bits (261), Expect = 3e-24
Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Frame = +3
Query: 84 DTYESVILVKNEVFVFKIPPRTSNRGYRAADWNLQEPQWTGRMRLVSKGNELVMKLEDKT 263
+ E V+ E +V+ IPPR + YRA +WN+ + W G +++VSKG E ++KLEDK
Sbjct: 16 EAVELVLFQVAECYVYLIPPRKTAASYRADEWNVNKWAWEGTLKVVSKGEECIIKLEDKN 75
Query: 264 SGELFAKCPIDKYPGVALEAVTDSSRYFVVKIQ---DDNGCAAYIGLGFGDRSDSFDLNV 434
+GEL+A+ + + +E V DSSRYFV++++ D A+IGLGF +R ++D
Sbjct: 76 TGELYARAFLREDEPHPVEPVIDSSRYFVLRVEENIDGRQRHAFIGLGFRERPQAYDFQA 135
Query: 435 ALQDHFKW 458
AL DH K+
Sbjct: 136 ALHDHMKY 143
>08_01_0045 + 322679-323347
Length = 222
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 215 PHATCPLWLLQVPICCPVSSVRCSGWYFKNEYFVL 111
P ++ P+WLL PI S+ CSG ++N VL
Sbjct: 41 PSSSPPVWLLSSPIRRSFSAADCSGSPWRNARVVL 75
>01_06_1164 -
35026345-35026954,35027853-35027939,35028120-35028493,
35037372-35038586,35038659-35039316,35039331-35041012
Length = 1541
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N V D T +L CP D YP ++ + DS+
Sbjct: 857 PEWLANPVVVPKANGKVRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 903
>09_06_0375 - 22653366-22657112,22657185-22658457,22658833-22659539
Length = 1908
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 737 PEWLANPVVVPKANSKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 783
>02_03_0116 - 15440263-15441024,15441097-15443451
Length = 1038
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 183 LQEPQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
L P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 859 LIHPEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 908
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 466 KNKRAIKHHRDNWILDLK 519
KN R+++ HR N+I DLK
Sbjct: 255 KNPRSVRKHRHNYIFDLK 272
>08_02_0088 - 12224160-12224173,12224185-12224593,12224657-12226099
Length = 621
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 558 PEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 604
>07_03_0508 - 18892193-18893119,18893183-18894528,18894594-18895206
Length = 961
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 730 PEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 776
>06_02_0121 + 12080417-12081632,12082428-12082780,12082844-12083776
Length = 833
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 600 PEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 646
>04_04_1405 -
33305948-33309676,33309749-33310468,33310533-33311439,
33334405-33334484
Length = 1811
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 646 PEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 692
>04_04_1081 - 30700791-30700904,30701011-30703053,30703126-30704376
Length = 1135
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 494 PEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 540
>04_04_0645 + 26913947-26915783,26915833-26916308,26916372-26917220
Length = 1053
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 848 PEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 894
>03_02_0330 + 7502593-7504956,7505020-7506312,7522011-7522235
Length = 1293
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 865 PEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 911
>02_03_0347 - 17999780-18000592,18000656-18003019
Length = 1058
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 865 PEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 911
>01_06_0717 -
31446860-31447074,31447183-31447270,31448909-31449012,
31449618-31449745,31450461-31450555,31461823-31463115,
31463188-31464039,31464568-31464621
Length = 942
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +3
Query: 192 PQWTGRMRLVSKGNELVMKLEDKTSGELFAKCPIDKYPGVALEAVTDSS 338
P+W +V K N + D T +L CP D YP ++ + DS+
Sbjct: 379 PEWLANPVVVPKANGKLRMCIDYT--DLNKACPKDPYPLPRIDQIVDST 425
>01_05_0449 -
22349299-22349310,22349842-22350011,22350232-22350303,
22351740-22351806,22352516-22352647,22352844-22353070,
22353150-22353359,22353565-22353687,22353971-22354075,
22354324-22354435
Length = 409
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/32 (25%), Positives = 18/32 (56%)
Frame = -1
Query: 383 CSTTIIILYFHNKIS*AISYSFQCNSWIFIYW 288
C +++++F N + S+S C + + +YW
Sbjct: 334 CGVLLVVVHFENHDNAGDSWSHSCTNRLILYW 365
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,575,358
Number of Sequences: 37544
Number of extensions: 343631
Number of successful extensions: 1051
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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