Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5i15
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0072 + 26184592-26184828,26184934-26185107,26185591-261857... 138 2e-33
05_07_0204 - 28397597-28397737,28398225-28398342,28399215-283993... 137 4e-33
08_02_0774 - 21047696-21048889 136 7e-33
01_06_1220 + 35493575-35494765 136 1e-32
07_03_1371 - 26100553-26101767 134 5e-32
03_06_0127 - 31872840-31872912,31873021-31873115,31873199-318732... 130 8e-31
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 129 1e-30
04_04_0587 + 26410808-26411338 31 0.70
06_03_0019 + 15506702-15506896,15507741-15507875,15508264-155085... 30 0.93
10_06_0120 - 10979458-10979665,10979909-10980585,10981315-109815... 29 1.6
05_04_0057 + 17543016-17543312 29 1.6
05_03_0485 + 14608663-14608989,14609265-14609535,14609720-146098... 29 1.6
10_03_0046 + 7357777-7357992 29 2.1
07_03_0730 + 21030123-21030338 29 2.1
04_01_0527 - 6913266-6913802 29 2.1
01_06_1064 + 34237919-34238155 29 2.1
08_02_1015 - 23597445-23597628,23597654-23597877 29 2.8
08_02_0114 + 12754155-12754370,12754792-12755340,12755410-127555... 28 3.7
06_01_1114 - 9179614-9180167,9180223-9180544,9181524-9181820,918... 28 5.0
05_06_0098 + 25560158-25560925 28 5.0
04_04_0928 + 29472658-29472772,29473198-29473304,29473441-29473497 28 5.0
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 5.0
02_02_0442 - 10318576-10319109 28 5.0
01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858 28 5.0
03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536... 27 6.5
12_02_1245 - 27308143-27308787,27308923-27308983,27309064-273094... 27 8.7
11_01_0719 - 5924088-5924362,5924458-5924605 27 8.7
10_07_0005 - 11744073-11745653 27 8.7
02_01_0530 - 3853274-3853666 27 8.7
01_05_0138 + 18516689-18518161 27 8.7
>01_06_0072 +
26184592-26184828,26184934-26185107,26185591-26185759,
26185863-26185924,26186506-26186630,26186735-26186852,
26187760-26187897
Length = 340
Score = 138 bits (335), Expect = 2e-33
Identities = 71/138 (51%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
Frame = +3
Query: 93 ALKPAALAVQNGAKNFSTTS-QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAP 269
+L +A V + +S+ S Q K IGQPL+LL+K NPLV+ L+LYDIA
Sbjct: 4 SLMRSASQVLRRRRGYSSASGQPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAG 63
Query: 270 VTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNAS 449
TPGVAAD+SH+N PA+V G G ++L A++ +D+V+IPAGVPRKPGMTRDDLFN NA
Sbjct: 64 -TPGVAADVSHINAPAQVKGFMGDDQLGEALEGSDIVIIPAGVPRKPGMTRDDLFNINAG 122
Query: 450 IVRDIALSIAQNAPKAIV 503
IV+++ +IA+ P A+V
Sbjct: 123 IVKNLCTAIAKYCPNALV 140
>05_07_0204 -
28397597-28397737,28398225-28398342,28399215-28399339,
28399683-28399744,28399867-28400035,28400594-28400767,
28400856-28401089
Length = 340
Score = 137 bits (332), Expect = 4e-33
Identities = 66/103 (64%), Positives = 83/103 (80%)
Frame = +3
Query: 195 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDAD 374
IGQPLALL+K NPLV+ L+LYDIA TPGVAAD+SH+N+PA V G G E+L A++ +D
Sbjct: 38 IGQPLALLMKLNPLVSSLSLYDIAG-TPGVAADVSHINSPALVKGFVGEEQLGEALEGSD 96
Query: 375 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIV 503
VV+IPAGVPRKPGMTRDDLFN NA IV+ + +I++ P A+V
Sbjct: 97 VVIIPAGVPRKPGMTRDDLFNINAGIVKGLCTAISKYCPNALV 139
>08_02_0774 - 21047696-21048889
Length = 397
Score = 136 bits (330), Expect = 7e-33
Identities = 71/126 (56%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
Frame = +3
Query: 129 AKNFSTTS-QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHM 305
AK+ S S + ++K IGQPL LL+K +PLV+ L LYDIA V GVAADLSH
Sbjct: 64 AKSGSQISPEASYKVAVLGAAGGIGQPLGLLIKMSPLVSELHLYDIANVK-GVAADLSHC 122
Query: 306 NTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQN 485
NTP++V GP EL+ +K DVVVIPAGVPRKPGMTRDDLFN NASIV+ + ++A N
Sbjct: 123 NTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASIVKSLVEAVADN 182
Query: 486 APKAIV 503
P+A +
Sbjct: 183 CPEAFI 188
>01_06_1220 + 35493575-35494765
Length = 396
Score = 136 bits (328), Expect = 1e-32
Identities = 70/137 (51%), Positives = 90/137 (65%)
Frame = +3
Query: 93 ALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPV 272
++ P + N + S + ++K IGQPL LL+K +PLV+ L LYDIA V
Sbjct: 55 SISPRIVPKANSGSHISP--EASYKVAVLGAAGGIGQPLGLLIKMSPLVSALHLYDIANV 112
Query: 273 TPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASI 452
GVAADLSH NTP++V GP EL+ +K DVVVIPAGVPRKPGMTRDDLFN NASI
Sbjct: 113 K-GVAADLSHCNTPSQVLDFTGPSELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINASI 171
Query: 453 VRDIALSIAQNAPKAIV 503
V+ + ++A N P+A +
Sbjct: 172 VKTLVEAVADNCPEAFI 188
>07_03_1371 - 26100553-26101767
Length = 404
Score = 134 bits (323), Expect = 5e-32
Identities = 66/103 (64%), Positives = 79/103 (76%)
Frame = +3
Query: 195 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDAD 374
IGQPL+LL+K +PLV+ L LYDIA V GV ADL H NTPAKV+G G EEL+ + D
Sbjct: 89 IGQPLSLLVKMSPLVSALHLYDIANVD-GVTADLGHCNTPAKVAGFTGKEELAGCLAGVD 147
Query: 375 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIV 503
VVVIPAGVPRKPGMTRDDLF NA IVR++ ++A +AP A+V
Sbjct: 148 VVVIPAGVPRKPGMTRDDLFGINAGIVRELVEAVADHAPAALV 190
>03_06_0127 -
31872840-31872912,31873021-31873115,31873199-31873288,
31873364-31873399,31874039-31874122,31874223-31874312,
31874426-31874740,31875674-31875883,31875965-31876036
Length = 354
Score = 130 bits (313), Expect = 8e-31
Identities = 65/114 (57%), Positives = 79/114 (69%)
Frame = +3
Query: 162 FKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGP 341
FK IGQPL+LL+K NPLV+ L LYD+ TPGV AD+SHM+T A V G GP
Sbjct: 43 FKVAVLGAAGGIGQPLSLLMKLNPLVSVLHLYDVVN-TPGVTADVSHMDTTAVVRGFLGP 101
Query: 342 EELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIV 503
+L AA+ D+V+IPAG+PRKPGMTRDDLFN NA IVR + +A+ P AIV
Sbjct: 102 NQLEAALTGMDLVIIPAGLPRKPGMTRDDLFNKNAGIVRSLCEGVAKCCPNAIV 155
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 129 bits (311), Expect = 1e-30
Identities = 67/114 (58%), Positives = 77/114 (67%)
Frame = +3
Query: 162 FKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGP 341
FK IGQPLALL+K NPLV+ L LYD+ TPGV AD+SHMNT A V G G
Sbjct: 58 FKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVN-TPGVTADISHMNTGAVVRGFLGQ 116
Query: 342 EELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIV 503
+L A+ D+V+IPAGVPRKPGMTRDDLFN NA IVR + IA+ P AIV
Sbjct: 117 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIV 170
>04_04_0587 + 26410808-26411338
Length = 176
Score = 30.7 bits (66), Expect = 0.70
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = -2
Query: 261 CRIKPAWSPEDSASVEGPKAGRYHRRHQRP 172
CR KPA SP A++ P GR RR +RP
Sbjct: 3 CRAKPASSPPSRAALAAP--GRCRRRRRRP 30
>06_03_0019 +
15506702-15506896,15507741-15507875,15508264-15508501,
15508652-15508855,15508945-15509111
Length = 312
Score = 30.3 bits (65), Expect = 0.93
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Frame = +3
Query: 195 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAK--VSGHK-GPEELSAAIK 365
IG+ + + +T + + D AP P AA L V G G + L AAIK
Sbjct: 20 IGRYIVAASAREDHLTSVLVRDPAPADPAKAAVLQGFRDSGATLVKGDLYGHQSLVAAIK 79
Query: 366 DADVVVIPAGVPRKPGMTR 422
ADVV+ G + TR
Sbjct: 80 SADVVISAVGYAQLADQTR 98
>10_06_0120 -
10979458-10979665,10979909-10980585,10981315-10981538,
10981763-10982136,10982203-10982786
Length = 688
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 317 QGQRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 418
Q +RPQGT A+ SH C CS+ S GND
Sbjct: 268 QEKRPQGTVKALDSHVTCEVCSNTGHS----GND 297
>05_04_0057 + 17543016-17543312
Length = 98
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 100 NLPPLLYKMVQRTFPPHHRGTLKWWSLVP 186
++P L+ V R PP RG +WW L P
Sbjct: 39 SVPSLVEVEVDRCGPPGRRGGRRWWLLCP 67
>05_03_0485 +
14608663-14608989,14609265-14609535,14609720-14609830,
14609870-14610423
Length = 420
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 323 QRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 418
+RPQGT A+ SH C C H S GND
Sbjct: 137 KRPQGTVQALDSHVTCEVCDHTGHS----GND 164
>10_03_0046 + 7357777-7357992
Length = 71
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 170 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 253
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>07_03_0730 + 21030123-21030338
Length = 71
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 170 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 253
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>04_01_0527 - 6913266-6913802
Length = 178
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Frame = -2
Query: 345 PQVPCGR*PWLGCSCGKG---RLRRRGSQALCRIKPA--WSPEDSASVEGPKAGRYHRRH 181
P++ C + + S G R RRR + CR P SPE S + HRRH
Sbjct: 79 PRLLCAKADTIAVSARLGHPVRRRRRAHRRQCRPSPPPPLSPEPSTAAVAEPPAAAHRRH 138
Query: 180 Q 178
Q
Sbjct: 139 Q 139
>01_06_1064 + 34237919-34238155
Length = 78
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 170 GGRWCRRWY-RPAFGPSTEAESSGDQAGF 253
GG RRW+ RPA G STE S + GF
Sbjct: 25 GGDGLRRWWCRPASGRSTERVSGREVGGF 53
>08_02_1015 - 23597445-23597628,23597654-23597877
Length = 135
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 246 AWSPEDSASVEGPKAGRYHRRHQRPPL*SSSVMW 145
AW+ ED+A + + G + RPP SS V W
Sbjct: 2 AWTVEDAAISDELRRGAWMTERTRPPPLSSDVAW 35
>08_02_0114 +
12754155-12754370,12754792-12755340,12755410-12755512,
12755552-12756060
Length = 458
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2
Query: 323 QRPQGT*GAISSHQRC*CCSHPSRSTP*TGND 418
+RPQGT A+ SH C CS ST +GND
Sbjct: 152 KRPQGTVKALDSHVTCEVCS----STGHSGND 179
>06_01_1114 -
9179614-9180167,9180223-9180544,9181524-9181820,
9181991-9182878,9182896-9182941,9182964-9183350,
9183648-9183985
Length = 943
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 323 QRPQGT*GAISSHQRC*CCSHPSRS 397
+RPQGT A+ SH C C + S S
Sbjct: 198 KRPQGTVKALDSHVTCEVCGNTSHS 222
>05_06_0098 + 25560158-25560925
Length = 255
Score = 27.9 bits (59), Expect = 5.0
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +3
Query: 228 NPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRK 407
+P V ++PVTP VA + +PA S PEE +AAI + P+ +
Sbjct: 163 SPSVLDFPSLALSPVTPLVADPFNR--SPASASSSASPEEEAAAIAQKGFFLHPSPRSAE 220
Query: 408 P 410
P
Sbjct: 221 P 221
>04_04_0928 + 29472658-29472772,29473198-29473304,29473441-29473497
Length = 92
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -1
Query: 379 TTSASLMAADSSSGPLWPLTLAGVFMWERSAATPGVTGAMSY 254
T S SL A+ SSS PL P+ + + ER A P +SY
Sbjct: 17 TISVSLAASPSSSHPLRPVASSVNLVMERVAKRPRGFAFLSY 58
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 230 SSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQR 328
+S D A F HS+C R P P QGQR
Sbjct: 985 ASPDAAAFAVHSSCSRALRMGPKPFAGTPQGQR 1017
>02_02_0442 - 10318576-10319109
Length = 177
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -2
Query: 345 PQVPCGR*PWLGCSCGKG---RLRRRGSQALCRIKP--AWSPEDSASVEGPKAGRYHRRH 181
P++ C + + S G R RRR + R P + SPE S + G HRRH
Sbjct: 78 PRLLCAKADTIAASARLGHPVRRRRRAHRRRRRPSPPPSLSPEPSTAAVGEPPAAAHRRH 137
Query: 180 Q 178
Q
Sbjct: 138 Q 138
>01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858
Length = 275
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 258 RIKPAWSPEDSASVEGPKAGRYHRRHQR 175
R+ PAW+PE+ A +E G Y RH R
Sbjct: 109 RLSPAWTPEEDACLERLARG-YGFRHWR 135
>03_02_0067 +
5364713-5364936,5365513-5367016,5367207-5368250,
5368467-5368577,5368997-5369068,5369719-5369737,
5369838-5371142,5371317-5371397,5372441-5372604,
5373363-5373466,5373537-5373628,5374079-5374216,
5374370-5374426,5374820-5375046
Length = 1713
Score = 27.5 bits (58), Expect = 6.5
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 376 TSASLMAADSSSGPLWPLTL--AGVFMWERSAATPGVTGAMSYKASLVTRGFCFSRRAK 206
TS + M SS + LTL G W R+ V + ++SLVTR F +RA+
Sbjct: 633 TSINSMPEGQSSRCIEELTLDLTGTLKWMRTCGLLDVKLEVQGESSLVTRDSVFGQRAE 691
>12_02_1245 -
27308143-27308787,27308923-27308983,27309064-27309440,
27309657-27310517
Length = 647
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 336 GPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALS 473
G L+ ++ + ++P P PG+ DD++N A + +A S
Sbjct: 577 GNVSLTLGLQHSSSNLVPNAQPGFPGVNEDDIYNATAPLGVTVASS 622
>11_01_0719 - 5924088-5924362,5924458-5924605
Length = 140
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 246 LALYDIAPVTPGVAADLSHMNTPAKVSG 329
L L +AP+ PG D H + PA +G
Sbjct: 8 LVLVLLAPLLPGTTGDQQHAHLPAAAAG 35
>10_07_0005 - 11744073-11745653
Length = 526
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 267 PVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIP 389
PV P V+ PA+ + P+ +AA++D V++P
Sbjct: 61 PVHPTVSPGFLRHRLPAEPPSRREPDAFAAAMQDVRDVILP 101
>02_01_0530 - 3853274-3853666
Length = 130
Score = 27.1 bits (57), Expect = 8.7
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -2
Query: 309 CSCGKGRL--RRRGSQALCRIKPA 244
C CG GRL R R ALC +PA
Sbjct: 26 CGCGLGRLVRRLRRQAALCAARPA 49
>01_05_0138 + 18516689-18518161
Length = 490
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 342 EELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIVA 506
E L A + + V +P+ V + TR T +I+R +ALS A N+ + A
Sbjct: 117 EHLVANVHSGETVSLPSRVVSQVTCTRK---TTTVAIIRAVALSAAPNSAGCLAA 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,050,811
Number of Sequences: 37544
Number of extensions: 396992
Number of successful extensions: 1299
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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