Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5i15
(508 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein. 155 6e-38
BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,... 155 1e-37
AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase pr... 155 1e-37
DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate de... 144 2e-34
AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein. 142 6e-34
BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein. 33 0.76
AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens ... 33 0.76
AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens ... 33 0.76
AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. 33 0.76
AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC... 33 0.76
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 31 3.1
S74659-1|AAC60643.2| 102|Homo sapiens aggrecan keratan sulfate ... 29 7.1
L27476-1|AAA61300.1| 1116|Homo sapiens X104 protein. 29 7.1
BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein ... 29 7.1
AL358113-3|CAM13389.1| 1043|Homo sapiens tight junction protein ... 29 7.1
AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein ... 29 7.1
AL358113-1|CAH70867.1| 993|Homo sapiens tight junction protein ... 29 7.1
AF489824-1|AAM28524.1| 993|Homo sapiens tight junction protein ... 29 7.1
AF177533-4|AAD56219.2| 1020|Homo sapiens tight junction protein ... 29 7.1
AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein ... 29 7.1
AF177533-2|AAD56218.2| 1043|Homo sapiens tight junction protein ... 29 7.1
AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein ... 29 7.1
>CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein.
Length = 338
Score = 155 bits (377), Expect = 6e-38
Identities = 79/141 (56%), Positives = 102/141 (72%)
Frame = +3
Query: 81 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 260
M S ++P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALVRPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 261 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 440
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 441 NASIVRDIALSIAQNAPKAIV 503
NA+IV + + AQ+ P+A++
Sbjct: 117 NATIVATLTAACAQHCPEAMI 137
>BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,
NAD (mitochondrial) protein.
Length = 338
Score = 155 bits (375), Expect = 1e-37
Identities = 79/141 (56%), Positives = 101/141 (71%)
Frame = +3
Query: 81 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 260
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 261 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 440
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 441 NASIVRDIALSIAQNAPKAIV 503
NA+IV + + AQ+ P+A++
Sbjct: 117 NATIVATLTAACAQHCPEAMI 137
>AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase
precursor protein.
Length = 338
Score = 155 bits (375), Expect = 1e-37
Identities = 79/141 (56%), Positives = 101/141 (71%)
Frame = +3
Query: 81 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 260
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 261 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNT 440
IA TPGVAADLSH+ T A V G+ GPE+L +K DVVVIPAGVPRKPGMTRDDLFNT
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNT 116
Query: 441 NASIVRDIALSIAQNAPKAIV 503
NA+IV + + AQ+ P+A++
Sbjct: 117 NATIVATLTAACAQHCPEAMI 137
>DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate
dehydrogenase 2, NAD protein.
Length = 305
Score = 144 bits (349), Expect = 2e-34
Identities = 72/117 (61%), Positives = 86/117 (73%)
Frame = +3
Query: 153 QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGH 332
Q N K IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+
Sbjct: 1 QNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGY 59
Query: 333 KGPEELSAAIKDADVVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIV 503
GPE+L +K DVVVIPAGVPRKPGMTRDDLFNTNA+IV + + AQ+ P+A++
Sbjct: 60 LGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMI 116
>AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein.
Length = 316
Score = 142 bits (344), Expect = 6e-34
Identities = 69/103 (66%), Positives = 83/103 (80%)
Frame = +3
Query: 195 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIKDAD 374
IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+ GPE+L +K D
Sbjct: 14 IGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLKGCD 72
Query: 375 VVVIPAGVPRKPGMTRDDLFNTNASIVRDIALSIAQNAPKAIV 503
VVVIPAGVPRKPGMTRDDLFNTNA+IV + + AQ+ P+A++
Sbjct: 73 VVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMI 115
>BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein.
Length = 627
Score = 32.7 bits (71), Expect = 0.76
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 125 RPPLGSSLSPWWRSSLTYFQQQ 146
>AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens
cDNA FLJ14786 fis, clone NT2RP4000737, moderately
similar to Mus musculus F-box protein FBL10 mRNA. ).
Length = 653
Score = 32.7 bits (71), Expect = 0.76
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 151 RPPLGSSLSPWWRSSLTYFQQQ 172
>AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ14534 fis, clone NT2RM2000599, weakly similar to
Homo sapiens F-box protein Lilina (LILINA) mRNA. ).
Length = 704
Score = 32.7 bits (71), Expect = 0.76
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 202 RPPLGSSLSPWWRSSLTYFQQQ 223
>AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.
Length = 1336
Score = 32.7 bits (71), Expect = 0.76
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 834 RPPLGSSLSPWWRSSLTYFQQQ 855
>AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC
domain 2 protein.
Length = 827
Score = 32.7 bits (71), Expect = 0.76
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 177 RPPL*SSSVMWWKSSLHHFVQQ 112
RPPL SS WW+SSL +F QQ
Sbjct: 358 RPPLGSSLSPWWRSSLTYFQQQ 379
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 30.7 bits (66), Expect = 3.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 200 PAFGPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRP 331
P G TE + G A + ++ +P PFP E PS + P
Sbjct: 761 PPTGAETEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEP 804
>S74659-1|AAC60643.2| 102|Homo sapiens aggrecan keratan sulfate
domain protein.
Length = 102
Score = 29.5 bits (63), Expect = 7.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 209 GPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRP 331
G +TE + G A + ++ +P PFP E PS + P
Sbjct: 1 GAATEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEP 41
>L27476-1|AAA61300.1| 1116|Homo sapiens X104 protein.
Length = 1116
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1190
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AL358113-3|CAM13389.1| 1043|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1043
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1190
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AL358113-1|CAH70867.1| 993|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 993
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AF489824-1|AAM28524.1| 993|Homo sapiens tight junction protein 2
protein.
Length = 993
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AF177533-4|AAD56219.2| 1020|Homo sapiens tight junction protein
ZO-2 isoform C protein.
Length = 1020
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 228 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 283
>AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein
ZO-2 isoform C protein.
Length = 1167
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 228 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 283
>AF177533-2|AAD56218.2| 1043|Homo sapiens tight junction protein
ZO-2 isoform A protein.
Length = 1043
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein
ZO-2 isoform A protein.
Length = 1190
Score = 29.5 bits (63), Expect = 7.1
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +2
Query: 188 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 352
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,602,592
Number of Sequences: 237096
Number of extensions: 2092793
Number of successful extensions: 5073
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5060
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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