Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5i07
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U80028-6|AAQ01536.1|  365|Caenorhabditis elegans Serpentine rece...    30   1.4  
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical...    29   2.4  
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical...    29   2.4  
Z81454-8|CAD60404.1|  330|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AL110479-6|CAB54354.2|  447|Caenorhabditis elegans Hypothetical ...    27   7.3  

>Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical
           protein C32H11.2 protein.
          Length = 332

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -1

Query: 176 LVFPKIYCFNSVILSCRSILLLKIMITIYAIYQIYKTTNKISKIELF 36
           L+FP I CF  ++     I L  ++   Y +YQ+ +  + I  I +F
Sbjct: 55  LLFPIINCFYKIMKFTYWITLSLVLAMYYTVYQLDRPKSNIPLINIF 101


>U80028-6|AAQ01536.1|  365|Caenorhabditis elegans Serpentine
           receptor, class w protein123 protein.
          Length = 365

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = -1

Query: 176 LVFPKIYCFNSVILSCRSILLLKIMITIYAIYQIYKTTNKISKI 45
           +V    Y FNS I      +LL +++TI  ++ ++KT+ K +KI
Sbjct: 215 IVMKYFYLFNSSISDIIPCILL-LIVTILLVWNLFKTSKKRTKI 257


>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23b protein.
          Length = 1156

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +2

Query: 434 LMDSRGDPR--VKDWPMMSSPWPTLAACV 514
           ++DS  DP    K W     PW TLAACV
Sbjct: 782 MLDSARDPLNGQKWWMSSDEPWQTLAACV 810


>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
           protein Y105E8A.23a protein.
          Length = 1138

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
 Frame = +2

Query: 434 LMDSRGDPR--VKDWPMMSSPWPTLAACV 514
           ++DS  DP    K W     PW TLAACV
Sbjct: 782 MLDSARDPLNGQKWWMSSDEPWQTLAACV 810


>Z81454-8|CAD60404.1|  330|Caenorhabditis elegans Hypothetical
           protein B0391.12 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = -1

Query: 158 YCFNSVI-LSCRSILL-LKIMITIYAIYQIYKTTNKISKI 45
           Y +NS I LS   IL+ L  +   Y  Y+IYKT N +S I
Sbjct: 193 YNWNSFIALSFMLILINLSFLTVFYCGYRIYKTINTLSSI 232


>AL110479-6|CAB54354.2|  447|Caenorhabditis elegans Hypothetical
           protein Y105C5B.8 protein.
          Length = 447

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 170 FPKIYCFNSVILSCRSILLLKIMITIYAIYQIY 72
           FPKI  FN     CR I+ +K  + I + ++IY
Sbjct: 369 FPKISHFNFPKQFCRIIIRIKKQVKILSFHKIY 401


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,037,350
Number of Sequences: 27780
Number of extensions: 220753
Number of successful extensions: 507
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)