Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5i06
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 54 9e-08
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 43 2e-04
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 33 0.11
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 0.75
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 1.7
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 29 3.0
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 5.3
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 5.3
U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol 1,4,5-... 27 9.2
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 27 9.2
AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical ... 27 9.2
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 27 9.2
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 27 9.2
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 53.6 bits (123), Expect = 9e-08
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +3
Query: 186 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD-ATG 362
T R+IGGS ++ + +P LL ++ CGG++++ +L+AAHC D
Sbjct: 53 TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPT 108
Query: 363 RWRIRVGSTFANSGGVVHNVNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPI 530
+ +RVG + SG H V + IHP YN S D I+R + + + RPI
Sbjct: 109 SYSVRVGGHRSGSGS-PHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPI 164
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/111 (28%), Positives = 57/111 (51%)
Frame = +3
Query: 198 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 377
RIIGG++ I+ A L ++ N CG +++ +++AAHC T R +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQT-RSFVY 93
Query: 378 VGSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPI 530
V N+ +V IH YN +TAD+D+ +LR +S+++ ++P+
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPV 142
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 33.5 bits (73), Expect = 0.11
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Frame = +3
Query: 198 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC-PYGDATGRWRI 374
R++GG T +P AAL N CG +IL++ +++AAHC + + +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 375 RVG---STFANSGGVVHNVNRIIIHPNYNRRTADSDLCILR-SNSNIAYNNNVRPINIAG 542
VG + + + + RI +P Y + D+ IL I +N +PI +
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 543 ANY 551
++
Sbjct: 142 KDF 144
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 30.7 bits (66), Expect = 0.75
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -3
Query: 470 TVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTT 291
T ++T +I G +V T TV GT T PT + T ++GT ++ + +TT
Sbjct: 205 TTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLNGTTTTTVPINGATT 264
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.5 bits (63), Expect = 1.7
Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Frame = -3
Query: 542 TSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPT 363
T++ T + IT EVT ++ V + T T T T TPT
Sbjct: 29 TADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPT 88
Query: 362 ACSVTVWTVSGTKDRSLVKDVSTTRXXXXXXXPCIQQSSYTGI---LVNVGRGATNNP 198
+ T T + T + +TT P ++ V++G G NNP
Sbjct: 89 TTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNPNAVSLGMGDANNP 146
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 450 NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 557
N AD D L ++ YNNN+R N+A N NL
Sbjct: 913 NESEADYDDIYLEKQNSGKYNNNIRHGNMAFRNANL 948
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 225 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 341
IN Y + + TW+ + C G + + R IL+A HC
Sbjct: 58 INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 288 SCGGNILNQRSILSAAHCPYG-DATGRWRIRVGSTFANS 401
+C G I++ R IL A HC G + G W + + TF S
Sbjct: 192 TCTGTIVSPRHILIATHCFAGQNRDGSWNL-IEDTFDRS 229
>U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol
1,4,5-trisphosphate receptorinteracting protein protein
1, isoform a protein.
Length = 923
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 464 SSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTV 336
+ TSVI G + + V+ NTP+V N NTP S ++ +
Sbjct: 869 NGTSVIRGKDGQVLRVIRNTPSV---SFNLNTPLTASKKMYFI 908
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 27.1 bits (57), Expect = 9.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 179 CSYQPTKDYWWLHD 220
CS P+K WW HD
Sbjct: 136 CSKNPSKTRWWFHD 149
>AF016452-4|AAB66015.1| 539|Caenorhabditis elegans Hypothetical
protein T05H4.9 protein.
Length = 539
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 513 CYKLCWNYCVRCRGHCQQYVCYS 445
CY L + +C RC+ +Y+C+S
Sbjct: 497 CYNLAFIFCARCK----EYICFS 515
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 27.1 bits (57), Expect = 9.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +3
Query: 291 CGGNILNQRSILSAAHC 341
CGG ++ + +L+AAHC
Sbjct: 62 CGGTLITLKHVLTAAHC 78
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -3
Query: 407 TPTVGKGGTNTNTPTACSVTVWTVSGT 327
T + G T T +CS T+WT + T
Sbjct: 601 TTRTSRTGVPTTTSRSCSTTIWTTATT 627
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,278,618
Number of Sequences: 27780
Number of extensions: 276911
Number of successful extensions: 688
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -