Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5h23
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016134-1|AAV37019.1|  568|Drosophila melanogaster GH11784p pro...    50   2e-06
AE014297-2463|AAF55511.1|  568|Drosophila melanogaster CG7183-PA...    50   2e-06
AY118451-1|AAM49820.1|  440|Drosophila melanogaster AT01479p pro...    29   4.8  
BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p pro...    28   8.4  
AE014298-1515|AAF47967.1| 1128|Drosophila melanogaster CG2186-PA...    28   8.4  

>BT016134-1|AAV37019.1|  568|Drosophila melanogaster GH11784p
           protein.
          Length = 568

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 44/163 (26%), Positives = 64/163 (39%), Gaps = 9/163 (5%)
 Frame = +2

Query: 119 KKILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKPP-----PVXXXXXXXXXXXX 283
           K I  N S L SLKAELLRKQ EV V K   +  A +F+P                    
Sbjct: 6   KAISVNLSSLLSLKAELLRKQHEVRVAK-ATKASAADFRPTKSAGNKEKSSDQGYKKVAS 64

Query: 284 XXXNLKAVDVEELQASRKSXXXXXXXXXXYEHLTDNAGNSQLAGRFLVDFSXXXXXXXXX 463
                K  + E+     KS          Y+ ++ N G+       LV F+         
Sbjct: 65  SDDGAKVYEAEDHAQLEKSRRILEAKSKFYDRMSRNGGSLNSDDNCLVMFNRKKQEADRE 124

Query: 464 XXXIVENKSGDEQVVANDNDDKDENEW----VEFTDCLGRTRK 580
                + +   +++ ++ +  +DE       VE+ DCLGRTRK
Sbjct: 125 PEQCTQRRESRQRLSSSSSSSQDEEGHDDLEVEYVDCLGRTRK 167


>AE014297-2463|AAF55511.1|  568|Drosophila melanogaster CG7183-PA
           protein.
          Length = 568

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 44/163 (26%), Positives = 64/163 (39%), Gaps = 9/163 (5%)
 Frame = +2

Query: 119 KKILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKPP-----PVXXXXXXXXXXXX 283
           K I  N S L SLKAELLRKQ EV V K   +  A +F+P                    
Sbjct: 6   KAISVNLSSLLSLKAELLRKQHEVRVAK-ATKASAADFRPTKSAGNKEKSSDQGYKKVAS 64

Query: 284 XXXNLKAVDVEELQASRKSXXXXXXXXXXYEHLTDNAGNSQLAGRFLVDFSXXXXXXXXX 463
                K  + E+     KS          Y+ ++ N G+       LV F+         
Sbjct: 65  SDDGAKVYEAEDHAQLEKSRRILEAKSKFYDRMSRNGGSLNSDDNCLVMFNRKKQEADRE 124

Query: 464 XXXIVENKSGDEQVVANDNDDKDENEW----VEFTDCLGRTRK 580
                + +   +++ ++ +  +DE       VE+ DCLGRTRK
Sbjct: 125 PEQCTQRRESRQRLSSSSSSSQDEEGHDDLEVEYVDCLGRTRK 167


>AY118451-1|AAM49820.1|  440|Drosophila melanogaster AT01479p
           protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 74  YTCNRKYL---NMEDQGAKKILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKPPP 244
           Y C++K     N +D+  K +   K      +AE+ +K E  L K     HK E+ K PP
Sbjct: 383 YLCSKKSKECPNKDDEALKCLQLKKQRQARAEAEMKKKAE--LKKNNSLSHKKEDDKAPP 440


>BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p
           protein.
          Length = 1203

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 545 PTHSHLCHHCHLP 507
           PTHSH+ HH H P
Sbjct: 440 PTHSHMMHHSHNP 452


>AE014298-1515|AAF47967.1| 1128|Drosophila melanogaster CG2186-PA
           protein.
          Length = 1128

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 545 PTHSHLCHHCHLP 507
           PTHSH+ HH H P
Sbjct: 365 PTHSHMMHHSHNP 377


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,559,967
Number of Sequences: 53049
Number of extensions: 335487
Number of successful extensions: 1162
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)