Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5h19
         (529 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113320-1|AAM29325.1|  110|Drosophila melanogaster AT28250p pro...    54   1e-07
AE013599-3894|AAM68318.1|  110|Drosophila melanogaster CG13585-P...    54   1e-07
AE013599-3893|AAF47223.1|  110|Drosophila melanogaster CG13585-P...    54   1e-07
BT003502-1|AAO39506.1| 1028|Drosophila melanogaster RE41896p pro...    29   5.2  
AE013599-668|AAF59075.1|  952|Drosophila melanogaster CG14748-PA...    29   5.2  
AY089694-1|AAL90432.1|  322|Drosophila melanogaster RH69794p pro...    28   9.0  
AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p pro...    28   9.0  
AE014297-466|AAS65121.1|  360|Drosophila melanogaster CG33324-PA...    28   9.0  
AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-P...    28   9.0  
AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-P...    28   9.0  
AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-P...    28   9.0  
AE014296-758|AAF47836.2|  322|Drosophila melanogaster CG14990-PA...    28   9.0  

>AY113320-1|AAM29325.1|  110|Drosophila melanogaster AT28250p
           protein.
          Length = 110

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +3

Query: 186 MGDEMDPCECLWNHELAMRRLISLLRQGQSYCTESECLEQLPGLP-QPESAG 338
           M D+ D CEC+W+ E AM+RLI+ +RQ Q+ C ++EC +     P Q + AG
Sbjct: 1   MSDDFDGCECVWSQEYAMQRLINFIRQNQNACGDNECYDVTGRTPHQAQIAG 52


>AE013599-3894|AAM68318.1|  110|Drosophila melanogaster CG13585-PB,
           isoform B protein.
          Length = 110

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +3

Query: 186 MGDEMDPCECLWNHELAMRRLISLLRQGQSYCTESECLEQLPGLP-QPESAG 338
           M D+ D CEC+W+ E AM+RLI+ +RQ Q+ C ++EC +     P Q + AG
Sbjct: 1   MSDDFDGCECVWSQEYAMQRLINFIRQNQNACGDNECYDVTGRTPHQAQIAG 52


>AE013599-3893|AAF47223.1|  110|Drosophila melanogaster CG13585-PA,
           isoform A protein.
          Length = 110

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +3

Query: 186 MGDEMDPCECLWNHELAMRRLISLLRQGQSYCTESECLEQLPGLP-QPESAG 338
           M D+ D CEC+W+ E AM+RLI+ +RQ Q+ C ++EC +     P Q + AG
Sbjct: 1   MSDDFDGCECVWSQEYAMQRLINFIRQNQNACGDNECYDVTGRTPHQAQIAG 52


>BT003502-1|AAO39506.1| 1028|Drosophila melanogaster RE41896p
           protein.
          Length = 1028

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +3

Query: 426 AKPAHNPHDRDGA-PPTPP 479
           ++P+HN  DRDGA PP PP
Sbjct: 402 SRPSHNYLDRDGAGPPGPP 420


>AE013599-668|AAF59075.1|  952|Drosophila melanogaster CG14748-PA
           protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +3

Query: 426 AKPAHNPHDRDGA-PPTPP 479
           ++P+HN  DRDGA PP PP
Sbjct: 326 SRPSHNYLDRDGAGPPGPP 344


>AY089694-1|AAL90432.1|  322|Drosophila melanogaster RH69794p
           protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 127 ITNYILERNYSTYVY*NNLK*KYLANYQQLRRHFSTVCL 11
           +   +  R +S  +  NN+   +LAN  +L+ H  T+CL
Sbjct: 134 VARVVQHREFSYLLGANNIALLFLANPFELKSHIRTICL 172


>AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p
           protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 334 ADSGCGSPGNCSRHSLSVQYDWP*RSSEIKRRM 236
           A  G  SP + +    S + +WP  S  IKR++
Sbjct: 342 AGDGSSSPSSANEDESSTEQEWPPSSGAIKRKL 374


>AE014297-466|AAS65121.1|  360|Drosophila melanogaster CG33324-PA
           protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
 Frame = +2

Query: 230 AGHAPLNLTAPS----RPIVLHGK--RMPRAITRASAAGVGWQQLHH 352
           AG+ PLNL AP+     P  L GK  + P+  +     G+  QQ HH
Sbjct: 269 AGNGPLNLDAPNTVGGAPAPLLGKSGKSPKEKSSPHHTGLNHQQQHH 315


>AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-PC,
           isoform C protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 334 ADSGCGSPGNCSRHSLSVQYDWP*RSSEIKRRM 236
           A  G  SP + +    S + +WP  S  IKR++
Sbjct: 342 AGDGSSSPSSANEDESSTEQEWPPSSGAIKRKL 374


>AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-PB,
           isoform B protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 334 ADSGCGSPGNCSRHSLSVQYDWP*RSSEIKRRM 236
           A  G  SP + +    S + +WP  S  IKR++
Sbjct: 342 AGDGSSSPSSANEDESSTEQEWPPSSGAIKRKL 374


>AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-PA,
           isoform A protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 334 ADSGCGSPGNCSRHSLSVQYDWP*RSSEIKRRM 236
           A  G  SP + +    S + +WP  S  IKR++
Sbjct: 342 AGDGSSSPSSANEDESSTEQEWPPSSGAIKRKL 374


>AE014296-758|AAF47836.2|  322|Drosophila melanogaster CG14990-PA
           protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 127 ITNYILERNYSTYVY*NNLK*KYLANYQQLRRHFSTVCL 11
           +   +  R +S  +  NN+   +LAN  +L+ H  T+CL
Sbjct: 134 VARVVQHREFSYLLGANNIALLFLANPFELKSHIRTICL 172


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,878,299
Number of Sequences: 53049
Number of extensions: 481373
Number of successful extensions: 1548
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)