Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5h12
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical p...   181   3e-46
Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical p...   181   3e-46
Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical pr...   181   3e-46
Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical pr...   181   3e-46
AF016449-7|AAG24000.2|  350|Caenorhabditis elegans Hypothetical ...    30   1.2  
Z92782-8|CAB07185.1|  197|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z82272-2|CAB05216.1|  342|Caenorhabditis elegans Hypothetical pr...    28   4.9  

>Z81041-14|CAN99675.1|  684|Caenorhabditis elegans Hypothetical
           protein C27A7.5e protein.
          Length = 684

 Score =  181 bits (441), Expect = 3e-46
 Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
 Frame = +2

Query: 59  RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRKLPQLHDDAYWKNNLAGTDKKDYLALP 235
           RVLVLYTGGT GM K   GV  P    +  V+R +P L+D  Y + + +    + Y +LP
Sbjct: 92  RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 149

Query: 236 DGKDTDVKILYQIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 415
             ++   +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY  
Sbjct: 150 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 209

Query: 416 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 595
           S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    IPEV V+F  KL RG
Sbjct: 210 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 269

Query: 596 TRVKK 610
            R  K
Sbjct: 270 NRTVK 274


>Z81041-13|CAN99674.1|  647|Caenorhabditis elegans Hypothetical
           protein C27A7.5d protein.
          Length = 647

 Score =  181 bits (441), Expect = 3e-46
 Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
 Frame = +2

Query: 59  RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRKLPQLHDDAYWKNNLAGTDKKDYLALP 235
           RVLVLYTGGT GM K   GV  P    +  V+R +P L+D  Y + + +    + Y +LP
Sbjct: 55  RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 112

Query: 236 DGKDTDVKILYQIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 415
             ++   +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY  
Sbjct: 113 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 172

Query: 416 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 595
           S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    IPEV V+F  KL RG
Sbjct: 173 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 232

Query: 596 TRVKK 610
            R  K
Sbjct: 233 NRTVK 237


>Z81041-5|CAB02790.1|  715|Caenorhabditis elegans Hypothetical
           protein C27A7.5c protein.
          Length = 715

 Score =  181 bits (441), Expect = 3e-46
 Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
 Frame = +2

Query: 59  RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRKLPQLHDDAYWKNNLAGTDKKDYLALP 235
           RVLVLYTGGT GM K   GV  P    +  V+R +P L+D  Y + + +    + Y +LP
Sbjct: 123 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 180

Query: 236 DGKDTDVKILYQIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 415
             ++   +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY  
Sbjct: 181 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 240

Query: 416 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 595
           S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    IPEV V+F  KL RG
Sbjct: 241 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 300

Query: 596 TRVKK 610
            R  K
Sbjct: 301 NRTVK 305


>Z81041-3|CAB02791.1|  713|Caenorhabditis elegans Hypothetical
           protein C27A7.5a protein.
          Length = 713

 Score =  181 bits (441), Expect = 3e-46
 Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 1/185 (0%)
 Frame = +2

Query: 59  RVLVLYTGGTFGMLKNEKGVLVPQKD-IESVIRKLPQLHDDAYWKNNLAGTDKKDYLALP 235
           RVLVLYTGGT GM K   GV  P    +  V+R +P L+D  Y + + +    + Y +LP
Sbjct: 121 RVLVLYTGGTIGM-KTTDGVYCPVPGYLPEVLRDIPPLNDRRYIEESYSNVAVRPY-SLP 178

Query: 236 DGKDTDVKILYQIYEYDELKDSSDFTIDDWIKMARDIKRFYHDYDGFVVLHGTDTTAYGG 415
             ++   +++Y I EY+ L DS D T DDWI++A DIK+ YH YDGFVVLHGTDT AY  
Sbjct: 179 PVRNMKKRVVYWIVEYEPLLDSCDMTFDDWIRIATDIKKAYHKYDGFVVLHGTDTLAYTA 238

Query: 416 SVLSFMLETVGKTVVLTGAQVPIFQPRSDGNNNLLCAVLIAATQRIPEVTVFFGAKLFRG 595
           S LSFM+E +GK V++TG+Q+P+ + RSDG  NL+ A++ A    IPEV V+F  KL RG
Sbjct: 239 SALSFMMENLGKPVIITGSQIPVAEVRSDGMENLIGALITAGNFDIPEVCVYFNNKLMRG 298

Query: 596 TRVKK 610
            R  K
Sbjct: 299 NRTVK 303


>AF016449-7|AAG24000.2|  350|Caenorhabditis elegans Hypothetical
           protein C50H11.13 protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 435 WKPSERLLYSLVLRFQYFNLEAMVTTICYALC 530
           W  S RLL+  V+      L  ++ T CY LC
Sbjct: 26  WTNSSRLLFYSVISISLLTLPILLLTFCYILC 57


>Z92782-8|CAB07185.1|  197|Caenorhabditis elegans Hypothetical
           protein F14F8.9 protein.
          Length = 197

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = -2

Query: 454 SLSDGFQHERQDRTTVRSCVGAVQNHESIV-IMVKPLNISRHFYPIVYREIRRIFEFIVF 278
           +L       R+    +++C   +  H+ +V +++   N SRH  P++Y ++  I+   + 
Sbjct: 111 TLGGALDFVREIEKALKNCKNKLIEHDEVVTLIIGKGNHSRHQVPVIYNKLIEIYSDRIS 170

Query: 277 VNLVQNFNIRVF 242
           V+ V+N   RVF
Sbjct: 171 VD-VKNTG-RVF 180


>Z82272-2|CAB05216.1|  342|Caenorhabditis elegans Hypothetical
           protein F55G11.5 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +2

Query: 182 YWKNNLAGTDKKDYLALPDGKDTDVKILYQIYEYDELKDSSDFTIDDW 325
           Y+ +   GT  K+Y AL   K   +    ++ ++      +DFT D W
Sbjct: 294 YYGSPTVGTIVKNYTALEINKAVPLNFQGEVLQFVVSSGKADFTFDGW 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,797,842
Number of Sequences: 27780
Number of extensions: 349141
Number of successful extensions: 958
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)