Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5h09
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    24   3.6  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.3  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   8.3  

>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -3

Query: 480 PTSLAARS*LPNKHKQSKTVPKTKGIVL 397
           P S   +S  P K K+ +++PK + +V+
Sbjct: 148 PKSSGGQSKQPKKKKKKRSLPKPEAVVI 175


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -1

Query: 119 FTRVIEF*QSDLHIILSRVYRVCEQ 45
           FT ++EF +  ++I+ S    +C Q
Sbjct: 283 FTNLVEFLEQRVNILKSSAQNICNQ 307


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 272 PGYQLAHCRWYTSMWSISHLNLHIG 346
           PGY L HC +   +    +L +HIG
Sbjct: 706 PGYWLFHCHFQFHIVIGMNLVVHIG 730


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,252
Number of Sequences: 2352
Number of extensions: 11325
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)