BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5h07
(565 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s... 26 0.74
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 24 3.9
AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl c... 23 6.9
DQ219482-1|ABB29886.1| 545|Anopheles gambiae cryptochrome 1 pro... 23 9.1
CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase ... 23 9.1
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 9.1
AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein. 23 9.1
AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein. 23 9.1
AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein. 23 9.1
AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein. 23 9.1
AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein. 23 9.1
AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein. 23 9.1
>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
symporter protein.
Length = 1127
Score = 26.2 bits (55), Expect = 0.74
Identities = 9/25 (36%), Positives = 19/25 (76%)
Frame = -2
Query: 132 DQGSTELLPHLLQTKLLFSSCRMKL 58
D G T LLP+++ T+ ++SC++++
Sbjct: 952 DGGLTLLLPYIISTRRNWASCKLRV 976
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 23.8 bits (49), Expect = 3.9
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 225 HYCSHLCQCWS*NT 184
HYC + QCW T
Sbjct: 30 HYCQNAIQCWKSRT 43
>AF017062-1|AAC47144.2| 649|Anopheles gambiae soluble guanylyl
cyclase beta subunit protein.
Length = 649
Score = 23.0 bits (47), Expect = 6.9
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +3
Query: 81 IITLFAANVVITQYCLDPSEPENVRFRGRKL*ECRCFKTNIGTSASSSGIY 233
+ +F+ V QYC ++PE + L E + S S+S IY
Sbjct: 499 VTLMFSGIVGFGQYCAANTDPEGAMKIVKMLNELYTIFDELTDSKSNSNIY 549
>DQ219482-1|ABB29886.1| 545|Anopheles gambiae cryptochrome 1
protein.
Length = 545
Score = 22.6 bits (46), Expect = 9.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 341 PPTELAVFASSIQIFLNLPRPIPTLNF 261
PP +F ++ I + PRP+ NF
Sbjct: 154 PPLTYQMFLHTVNIIGDPPRPVGAPNF 180
>CR954257-9|CAJ14160.1| 573|Anopheles gambiae putative esterase
protein.
Length = 573
Score = 22.6 bits (46), Expect = 9.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 159 GIGHFRVLRDQGSTELLPHLLQTKLLFSSCRM 64
G G F Q ST L+P+ QT+ F + R+
Sbjct: 233 GAGLFHRAIAQSSTALVPYAFQTRPRFYADRI 264
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 9.1
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +1
Query: 202 LAQVRAVVEFMQKHPDLAHKKLRVGMGRGKFKKIWMELAKTANSV 336
++++ +VVEF P K++R + + WM+ + T + V
Sbjct: 140 ISRLHSVVEFSSAKPSDPRKRVRPLKKQLDLEAAWMQPSSTISLV 184
>AY341201-1|AAR13765.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 22.6 bits (46), Expect = 9.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 216 SHLCQCWS*NTDTLRVFYLGIGHFRVLRDQGSTELLPHLLQTKLLFSSCR 67
++L C S D R+ L V D +L PHLL+ F SCR
Sbjct: 70 TYLASCCSDKADEERLLMLA-NESSVYEDWRYWKL-PHLLEVLEEFPSCR 117
>AY341200-1|AAR13764.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 22.6 bits (46), Expect = 9.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 216 SHLCQCWS*NTDTLRVFYLGIGHFRVLRDQGSTELLPHLLQTKLLFSSCR 67
++L C S D R+ L V D +L PHLL+ F SCR
Sbjct: 70 TYLASCCSDKADEERLLMLA-NESSVYEDWRYWKL-PHLLEVLEEFPSCR 117
>AY341199-1|AAR13763.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 22.6 bits (46), Expect = 9.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 216 SHLCQCWS*NTDTLRVFYLGIGHFRVLRDQGSTELLPHLLQTKLLFSSCR 67
++L C S D R+ L V D +L PHLL+ F SCR
Sbjct: 70 TYLASCCSDKADEERLLMLA-NESSVYEDWRYWKL-PHLLEVLEEFPSCR 117
>AY341198-1|AAR13762.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 22.6 bits (46), Expect = 9.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 216 SHLCQCWS*NTDTLRVFYLGIGHFRVLRDQGSTELLPHLLQTKLLFSSCR 67
++L C S D R+ L V D +L PHLL+ F SCR
Sbjct: 70 TYLASCCSDKADEERLLMLA-NESSVYEDWRYWKL-PHLLEVLEEFPSCR 117
>AY341197-1|AAR13761.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 22.6 bits (46), Expect = 9.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 216 SHLCQCWS*NTDTLRVFYLGIGHFRVLRDQGSTELLPHLLQTKLLFSSCR 67
++L C S D R+ L V D +L PHLL+ F SCR
Sbjct: 70 TYLASCCSDKADEERLLMLA-NESSVYEDWRYWKL-PHLLEVLEEFPSCR 117
>AY341196-1|AAR13760.1| 154|Anopheles gambiae NOS protein.
Length = 154
Score = 22.6 bits (46), Expect = 9.1
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -2
Query: 216 SHLCQCWS*NTDTLRVFYLGIGHFRVLRDQGSTELLPHLLQTKLLFSSCR 67
++L C S D R+ L V D +L PHLL+ F SCR
Sbjct: 70 TYLASCCSDKADEERLLMLA-NESSVYEDWRYWKL-PHLLEVLEEFPSCR 117
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,908
Number of Sequences: 2352
Number of extensions: 10179
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52983882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -