Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5h06
         (588 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   1.4  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   1.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   5.5  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   7.3  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   9.7  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    23   9.7  

>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 343 NVHKLCAVTYVWAFQAYGVQSG 408
           N+H LC +  +W  + +G+ SG
Sbjct: 128 NIHNLCVLRVIW--RVFGISSG 147


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 557 CNLKLFSSRLYKISTNTLTVHNTIKFVSRHIRIQKSH 447
           C+  L     +++   T + HNTIKFV   +  Q+++
Sbjct: 185 CSPSLVGDNNWRVCDETPSDHNTIKFVVGRVPRQRAN 221


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/41 (24%), Positives = 21/41 (51%)
 Frame = -2

Query: 563 FKCNLKLFSSRLYKISTNTLTVHNTIKFVSRHIRIQKSHTS 441
           ++ N   F+ RL+K + +   ++N  +F +   R+Q    S
Sbjct: 354 YRLNRSAFNFRLFKYAASAHRLYNRARFEAYSSRLQSRFRS 394


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -3

Query: 460 FKNLTLRSFHRLWTQQSRHSERHKPEMP 377
           F+   + S  R+W  Q      H PE P
Sbjct: 19  FRQAEIASLLRIWNIQMETPADHNPERP 46


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = -2

Query: 233 VSSVCADPIVYAKVSKLKRARNSKIECETN 144
           +SS C++P++Y  ++   R   +++ C T+
Sbjct: 319 MSSACSNPLLYGWLNDNFRKEFNELLCRTS 348


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 22.6 bits (46), Expect = 9.7
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 499 YTILSNSFHVTFAFKNLTLRSFHRLWTQQSRHSERHKPEM 380
           Y + +  F V+ A+  L LRS H  W  +     R KP +
Sbjct: 6   YVLTAFVFVVSIAY--LYLRSRHNYWRDRCFPYTRQKPHL 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,036
Number of Sequences: 2352
Number of extensions: 12860
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)