Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5h05
         (555 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          26   0.95 
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   2.9  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   2.9  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   2.9  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   8.9  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   8.9  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.8 bits (54), Expect = 0.95
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +2

Query: 413 YARRLEPKSSSRSGKAPITIGLSSSRA 493
           YA  L P SSS S  +P ++   +SRA
Sbjct: 61  YASALSPSSSSASPSSPSSVASPNSRA 87


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +1

Query: 199 GSFEKCSLLTAVLTHVGLYVLMFLGFVNQLIFKPKAATEKNRE 327
           G F+K  +LT   T  G Y +++  ++ +L+ K +  T    E
Sbjct: 471 GRFKKTEILTGSNTEEGYYFIIY--YLTELLRKEEGVTVTREE 511


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +1

Query: 199 GSFEKCSLLTAVLTHVGLYVLMFLGFVNQLIFKPKAATEKNRE 327
           G F+K  +LT   T  G Y +++  ++ +L+ K +  T    E
Sbjct: 471 GRFKKTEILTGSNTEEGYYFIIY--YLTELLRKEEGVTVTREE 511


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +1

Query: 199 GSFEKCSLLTAVLTHVGLYVLMFLGFVNQLIFKPKAATEKNRE 327
           G F+K  +LT   T  G Y +++  ++ +L+ K +  T    E
Sbjct: 357 GRFKKTEILTGSNTEEGYYFIIY--YLTELLRKEEGVTVTREE 397


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -2

Query: 515 RLTQRRSTPVNLKVQL*SVLSHSLRTTSAPGAEHIGRLKQCR 390
           RL Q  S P   K +L + ++ S+   +AP      ++++CR
Sbjct: 823 RLMQNHSGPRTAKSRLLAYVAESVLRYAAPVWAEATQVRECR 864


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 274 SPGT*ERKVQRA*GRRSVGNTSRTSPGTCRTWTSLSLAGRLPPLVSSS 131
           S  T  R+ Q+A G+RS   + R+S      W   +    L  + SSS
Sbjct: 1   SSRTTRRQRQKAFGKRSSSASLRSSAANFAAWLRGNSGSPLSSISSSS 48


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,910
Number of Sequences: 2352
Number of extensions: 12839
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)