Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5g20
(397 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0941 - 20950190-20951088,20952436-20952478,20952580-209526... 33 0.063
01_01_1111 - 8791925-8792649,8793506-8793890,8794341-8794618,879... 31 0.25
04_01_0446 - 5815231-5816202 31 0.44
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 31 0.44
03_05_0630 + 26260159-26260272,26260520-26260894 30 0.78
08_02_0595 + 19097299-19097462,19097490-19097910 29 1.0
04_04_1224 + 31858110-31858338,31859180-31859301,31859398-318595... 29 1.4
12_02_1262 + 27415191-27415279,27415367-27415565,27415635-274157... 29 1.8
12_02_1219 + 27096477-27096590,27096704-27097078 29 1.8
08_01_0531 - 4604556-4604582,4604829-4604921,4605381-4605572,460... 29 1.8
12_01_0525 - 4169605-4170417 28 2.4
12_01_0242 + 1812891-1812897,1814073-1814830 28 2.4
07_01_0975 + 8223269-8224354 28 2.4
01_07_0290 - 42542201-42542359,42542443-42542551,42542729-425435... 28 2.4
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 28 3.1
01_07_0101 + 41086735-41086809,41088634-41088721,41089727-410899... 28 3.1
07_01_0595 - 4432642-4432926,4433062-4433769,4433964-4434164,443... 27 4.1
03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906 27 4.1
12_02_0803 + 23318429-23318552,23318688-23319877,23320724-233215... 27 5.5
12_02_0770 - 23007202-23007333,23007475-23007555,23007642-230077... 27 5.5
09_04_0242 + 15969091-15969128,15970172-15970409,15971439-159716... 27 5.5
05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225 27 5.5
04_03_0081 - 10829429-10829758 27 5.5
01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272... 27 5.5
12_02_0651 + 21522089-21522128,21522472-21522593,21523386-215235... 27 7.2
11_01_0355 + 2679561-2680985,2681183-2682295 27 7.2
07_03_1533 + 27523811-27524710 27 7.2
04_04_0766 - 27923120-27923554,27923843-27924580,27924815-279248... 27 7.2
04_01_0422 + 5573833-5574647,5575577-5575692,5576922-5577130,557... 27 7.2
03_05_1125 + 30576951-30577010,30577163-30577285,30577393-305775... 27 7.2
07_01_1170 - 11065780-11066145,11066297-11066425,11066675-11067673 26 9.6
05_03_0113 + 8526595-8527440,8527662-8528357 26 9.6
03_05_1071 + 30133696-30133874,30134294-30135200,30135224-301353... 26 9.6
01_05_0561 - 23296977-23297174,23297304-23297431,23297990-232983... 26 9.6
>04_03_0941 -
20950190-20951088,20952436-20952478,20952580-20952606,
20953189-20953301,20953872-20954715,20955740-20955790,
20956026-20956126,20956205-20956244,20956360-20957124
Length = 960
Score = 33.5 bits (73), Expect = 0.063
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -1
Query: 349 DDDLDEGSAISAGDSHRGTFNNGRSNRDGLV-GVNKSRSDG-DGLVGVNKS-RSNRDGHV 179
+DD + G + D + T + +SN D L G NKS +D G G NKS +
Sbjct: 708 NDDNESGYKNTNTDEYGSTGSYNKSNTDDLTGGFNKSGTDDYSGGGGYNKSGADDYSSSG 767
Query: 178 GVNKS-RSNRDGFVGVNKSRSN 116
G +KS N G G NKS +N
Sbjct: 768 GYSKSGTDNYSGSGGYNKSGNN 789
Score = 33.1 bits (72), Expect = 0.083
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -1
Query: 346 DDLDEG--SAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGV 173
DD D G + S D + G+ + S D G N S +DG G G NKS S + G
Sbjct: 830 DDYDGGYKKSSSNDDGYGGSGYSKPSTGDYDSGKNASNTDGYGGSGYNKS-STDNSESGY 888
Query: 172 NKSRSNRDGF-VGVNKSRSN 116
NKS + G G NKS ++
Sbjct: 889 NKSGTGEYGSGGGYNKSSTD 908
Score = 28.7 bits (61), Expect = 1.8
Identities = 27/95 (28%), Positives = 36/95 (37%)
Frame = -1
Query: 394 NINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVG 215
N +G G+ G + D D G S D + G+ N S + G NKS + G G
Sbjct: 842 NDDGYGGS-GYSKPSTGDYDSGKNASNTDGYGGSGYNKSSTDNSESGYNKSGTGEYGSGG 900
Query: 214 VNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGD 110
S + G NKS + G G GD
Sbjct: 901 GYNKSSTDNYESGYNKSGTGDYGSGGGYDKSDAGD 935
>01_01_1111 -
8791925-8792649,8793506-8793890,8794341-8794618,
8794998-8795163
Length = 517
Score = 31.5 bits (68), Expect = 0.25
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 221 EPISVGPALVDTYE--PISVGPAIVEGAPVTVTGADGTPLVQIIINVNRPSE 370
EP P+++ T + P + VE APVTV DG I N+ PS+
Sbjct: 178 EPYDAPPSVISTEQLNPAAEPVVGVEAAPVTVAEPDGVTTSAITANIPSPSD 229
>04_01_0446 - 5815231-5816202
Length = 323
Score = 30.7 bits (66), Expect = 0.44
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = -1
Query: 307 SHRGTFNNGRSNR-DGLVGVNKSRSDGDGLVGVNKSRSNRDG--HVGVNKSRSNRDGFVG 137
SH+ + R+ R G G + SDG G VG +SRS DG + G++G
Sbjct: 101 SHKRDIDGARAQRWSGGSGWGRCPSDGSGGVGWGRSRSGSDGWRRMWTEPESGGGGGWIG 160
Query: 136 VNKSR 122
R
Sbjct: 161 TEPKR 165
>02_01_0369 +
2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 30.7 bits (66), Expect = 0.44
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 233 VGPALVDTYEPISVGPAIVEGAPVTVTGADGTPLVQIIINVNRPSEIAAD 382
VG + + E ++ GP EGA + VTGADG+ L +I +P E+ D
Sbjct: 142 VGVSEHGSLEHVNPGPGDGEGATIPVTGADGSGL---LIEGAQPVEMDVD 188
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 29.9 bits (64), Expect = 0.78
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 295 TFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVG 176
TF++ +S RD + G+N DG + VN+++S R G G
Sbjct: 55 TFSSEQSMRDAIEGMNGKELDGRNIT-VNEAQSRRSGGGG 93
>08_02_0595 + 19097299-19097462,19097490-19097910
Length = 194
Score = 29.5 bits (63), Expect = 1.0
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -1
Query: 346 DDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGH 182
DD + S A D +G +G G+ GV GDG+ GV N+DG+
Sbjct: 93 DDAAQPSNKGAADGFQGDQGDGSQ---GVQGVGSQGIQGDGVQGVQGGGLNQDGN 144
>04_04_1224 +
31858110-31858338,31859180-31859301,31859398-31859507,
31859661-31859725,31859940-31860004,31860387-31860632,
31861212-31861313,31861484-31861534,31862015-31862105,
31862777-31862841
Length = 381
Score = 29.1 bits (62), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 239 PALVDT-YEPISVGPAIVEGAPVTVTGADGTPLVQI 343
PA + T Y P+ VGPA + +P VTG +V +
Sbjct: 290 PARIGTPYHPMQVGPAYISPSPQPVTGGKFNHVVYV 325
>12_02_1262 +
27415191-27415279,27415367-27415565,27415635-27415775,
27415939-27416003,27416111-27416489,27416688-27417149,
27417226-27417546,27418184-27418501
Length = 657
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 313 GDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKS 203
GDS G N G +DG+ + S +D D VNKS
Sbjct: 239 GDSANGVENYGHKLKDGISSITSSETDND---DVNKS 272
>12_02_1219 + 27096477-27096590,27096704-27097078
Length = 162
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -1
Query: 295 TFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVG 176
TF++ ++ RD + G+N DG + VN+++S R G G
Sbjct: 55 TFSSEQAMRDAIEGMNGKELDGRNIT-VNEAQSRRSGGGG 93
>08_01_0531 -
4604556-4604582,4604829-4604921,4605381-4605572,
4605800-4606390
Length = 300
Score = 28.7 bits (61), Expect = 1.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 40 ICDHHRRLRCRGHSRPCPWQ 99
+ H R L CRG +RP PW+
Sbjct: 57 VARHARALLCRGCARPTPWR 76
>12_01_0525 - 4169605-4170417
Length = 270
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = -1
Query: 367 GRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRD 188
G + V ++ + G GD G RSN + G G GV S ++
Sbjct: 32 GERILVGENRNGGGGYGGGDRRAGREGRTRSNTLAIAASFAKLEGGGGGDGVRVSNHSKP 91
Query: 187 GHVGVN 170
+GVN
Sbjct: 92 NAIGVN 97
>12_01_0242 + 1812891-1812897,1814073-1814830
Length = 254
Score = 28.3 bits (60), Expect = 2.4
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Frame = -1
Query: 340 LDEGSAISAGDSHRGTFNNGRS-----NRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVG 176
L + SA++ DS G +NN + NRD GVN++R ++ + N GH+
Sbjct: 179 LADSSALA--DSSWGNWNNSNNHHSSNNRDSFNGVNRNRYQDPN--SISGRKRNSGGHIQ 234
Query: 175 VNKS--RSNRDGFVG 137
S R+ +G+ G
Sbjct: 235 QRNSRQRNQTEGYQG 249
>07_01_0975 + 8223269-8224354
Length = 361
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -2
Query: 324 PSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGPTEMG 145
PS + + A S GPT G +GP+ G+ GP+ G GP+ G
Sbjct: 264 PSGSPSGSPAGSPAGGPTAGGP----ASGPSSYGAASGPAEGPSSSGAASGPAEGPSPSG 319
Query: 144 S*VSTRAGPTEMGS 103
+ GP+ GS
Sbjct: 320 A-AGPAEGPSSYGS 332
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = -2
Query: 303 TGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGPTEMGS*VSTRA 124
+G+PS+ + GS + AG G S GP+ G GP+ G+
Sbjct: 257 SGSPSSSPSGSPSGSPAGSPAGGPTAGGPAS---GPSSYGAASGPAEGPSSSGAASGPAE 313
Query: 123 GPTEMGSYLP 94
GP+ G+ P
Sbjct: 314 GPSPSGAAGP 323
>01_07_0290 - 42542201-42542359,42542443-42542551,42542729-42543516,
42543601-42543744,42543840-42544013,42544056-42544369,
42544467-42544636,42544916-42545043,42545125-42545185,
42545473-42545642,42545783-42547387,42547479-42547631,
42547747-42547905,42548066-42548236,42548357-42548404,
42548509-42548624,42548885-42549029,42549122-42549220
Length = 1570
Score = 28.3 bits (60), Expect = 2.4
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -1
Query: 316 AGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVG 137
AG S G +N +NR G +S+G G + +R N+ G V KS ++ G G
Sbjct: 1368 AGSSRPGEWNRKNNNRGQGGGREVWKSEGPHRGGSSSNR-NQGGGRAVWKSEASHRG-SG 1425
Query: 136 VNKSRSNG 113
N++R G
Sbjct: 1426 NNRNRGGG 1433
>05_06_0005 + 24802843-24803101,24804086-24804333,24804417-24804572,
24804956-24805114,24805862-24805929,24806044-24806433,
24806515-24806563,24806636-24806788,24807416-24807589,
24808207-24808362,24808705-24808756,24808830-24808988,
24809058-24809094,24809218-24809252,24809349-24809400,
24809614-24809663,24810590-24811924,24812688-24812825,
24812907-24812957,24813081-24814237
Length = 1625
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1
Query: 343 DLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSD 233
D ++G+ +GD++ T+ +GR NRD N +R+D
Sbjct: 1401 DRNQGNNYGSGDNNDRTWGSGRGNRDQDGCKNWNRND 1437
>01_07_0101 +
41086735-41086809,41088634-41088721,41089727-41089923,
41090077-41090266,41090469-41090860,41091390-41091965
Length = 505
Score = 27.9 bits (59), Expect = 3.1
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = -1
Query: 379 SGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD-GLVGVNKSRSDGDGLVGVNKS 203
SG G HV + L EG A G + +G ++R VG +KSRS G GL
Sbjct: 12 SGGGGGACHVSNVL-EGEAKKPGADSKDARKDGSADRGVSRVGSDKSRSHG-GLDSKKDV 69
Query: 202 RSNRDGH 182
RDG+
Sbjct: 70 VIQRDGN 76
>07_01_0595 -
4432642-4432926,4433062-4433769,4433964-4434164,
4434296-4435288
Length = 728
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 322 ISAGDSHRGTFNNGR-SNRDGLVGVNKSRSDGDG----LVGVNKSRSNRDGH 182
++ D RG R + RD +V + + DGDG LVGV ++ R GH
Sbjct: 188 VNDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGH 239
>03_03_0236 - 15696495-15696977,15697290-15697339,15699867-15699906
Length = 190
Score = 27.5 bits (58), Expect = 4.1
Identities = 26/93 (27%), Positives = 35/93 (37%)
Frame = -1
Query: 385 GISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 206
G S +G V ++ D+D+ D R T N G S G + D D + N
Sbjct: 90 GHSPGIGHHVAINGDVDD-------DDVRPT-NPGHSPGIGHHAIVNGADDADDVRPTNP 141
Query: 205 SRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 107
S GH VN + + D N S G G
Sbjct: 142 GHSPGIGHAVVNSADDDADDVRPTNPGHSPGIG 174
>12_02_0803 + 23318429-23318552,23318688-23319877,23320724-23321528,
23321938-23322417,23322535-23322815,23323207-23323302,
23323423-23323548,23324100-23325890
Length = 1630
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 134 DTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPI 268
+T P S PAL+++ + + GP+L+ E I LVD E +
Sbjct: 1465 ETIGPTSANPALINSVLEVCYGPSLLP--ETIGEVKYLVDFVESV 1507
>12_02_0770 -
23007202-23007333,23007475-23007555,23007642-23007742,
23007855-23008455,23008742-23009365,23010294-23010377
Length = 540
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 256 GVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSR 122
G N+ S+G G G SR GH G S NR+ G +K+R
Sbjct: 148 GSNQLHSEGSGGGGGGSSRKGESGH-GAVVSAGNRESSTG-DKTR 190
>09_04_0242 +
15969091-15969128,15970172-15970409,15971439-15971668,
15972235-15972469,15973133-15973224,15973333-15973336
Length = 278
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/61 (27%), Positives = 24/61 (39%)
Frame = -1
Query: 313 GDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGV 134
G ++ G+F +N LVG K + ++ VN S G G R VG
Sbjct: 157 GSTNLGSFFGSVTNEAALVGKLKDTPPEEHMMTVNADYSGAGGSSGAPVFRGENGKVVGT 216
Query: 133 N 131
N
Sbjct: 217 N 217
>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
Length = 554
Score = 27.1 bits (57), Expect = 5.5
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -1
Query: 295 TFNNGRSNR---DGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVN 170
T + GRS+R GL G+ + RSD + G+ S + GHV +N
Sbjct: 486 TGDQGRSDRLHAAGLTGIPE-RSDRPCVAGLTGSGQSAGGHVSIN 529
>04_03_0081 - 10829429-10829758
Length = 109
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = -1
Query: 394 NINGISGNLGRTVH-VDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLV 218
++ GI + R V D + S S D +G +G G+ GV GDG
Sbjct: 32 DVPGIGSSKDREVQQAPDGAAQPSDKSVADGSQGVQGDGSQ---GVQGVGSHGIQGDGSQ 88
Query: 217 GVNKSRSNRDGHV 179
G N+DG++
Sbjct: 89 GFQGGNLNQDGNM 101
>01_06_1795 -
39925019-39926029,39926265-39926408,39927200-39927277,
39927722-39927838,39927925-39927981,39928492-39928623,
39928725-39928922,39929364-39929474,39929570-39929785,
39929879-39930064,39930590-39931192
Length = 950
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 182 VPISVGPALVDTYEPISVGPALVDTYEPIS--VGPA 283
+P + P L+D EP+S P L D + + +GPA
Sbjct: 831 IPSAPPPDLLDLGEPVSSSPPLADPFTQLEGLLGPA 866
>12_02_0651 +
21522089-21522128,21522472-21522593,21523386-21523544,
21523653-21523730,21523821-21523865,21524121-21524187,
21524261-21524322,21524407-21524546,21524752-21524878,
21524957-21525071,21525210-21525298,21525533-21525616,
21525857-21526219,21526300-21526689,21526835-21526894,
21527530-21527553
Length = 654
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 379 SGNLGRTVHVDDDLDEGSAISAGDSHR 299
S NL TVH D++L + AG+ R
Sbjct: 616 SNNLSNTVHADNELHSTRRVLAGEQSR 642
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 340 LDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGL 221
LD +A G H G+ N+G R +++R D D +
Sbjct: 187 LDHANAAGGGGGHAGSPNSGHGGRRKESSSSRARVDDDAM 226
>07_03_1533 + 27523811-27524710
Length = 299
Score = 26.6 bits (56), Expect = 7.2
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Frame = -1
Query: 349 DDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKS--RSNRDGHVG 176
DDD D+ GD G G G G + DG G G RSNR V
Sbjct: 75 DDDDDDEDDQGGGDDDGGGGGGGGGGGGGGGGDDSGGDDGGGGGGGGDGDRRSNRKSMVT 134
Query: 175 VNKSRSNRDGFVGVN 131
V+ D + VN
Sbjct: 135 VDAEVDTDDDALRVN 149
>04_04_0766 -
27923120-27923554,27923843-27924580,27924815-27924874,
27925281-27925328
Length = 426
Score = 26.6 bits (56), Expect = 7.2
Identities = 20/60 (33%), Positives = 25/60 (41%)
Frame = +2
Query: 137 TYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPAIVEGAPVTVTG 316
T +PIS PALVD + S G A + +E + G A VE TV G
Sbjct: 33 TTDPISEDPALVDR-IAASFWDTPPRAAFSSEAGDADIVVFEDLDHGNAAVEATTTTVPG 91
>04_01_0422 +
5573833-5574647,5575577-5575692,5576922-5577130,
5579676-5579795,5581616-5581744,5581828-5581953,
5582945-5583000,5583084-5583183,5585155-5585272,
5585374-5585583,5585902-5586226,5587094-5587187,
5588021-5588129,5588246-5588514,5589153-5589280,
5589983-5590217,5590858-5591046,5591326-5591609,
5591698-5591890,5592040-5592207,5592429-5592514,
5594391-5594550
Length = 1412
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 331 GSAISAGDSHRGTFNNGRSNRDGLVG 254
GS S G+SHRGT N G +G
Sbjct: 682 GSLSSDGESHRGTKKNSNGTYKGGIG 707
>03_05_1125 +
30576951-30577010,30577163-30577285,30577393-30577552,
30577635-30577702,30577928-30578473,30578725-30579312,
30579392-30579604,30580227-30580388
Length = 639
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -1
Query: 283 GRSNRDGL-VGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNG 113
G + + GL G N S +G G+ S+ G N+DGF +N+ +G
Sbjct: 355 GNALKTGLGFGSNMYNSRNNGRWGIVDSKYKPRGRASFGFGSENQDGFTELNRGPRSG 412
>07_01_1170 - 11065780-11066145,11066297-11066425,11066675-11067673
Length = 497
Score = 26.2 bits (55), Expect = 9.6
Identities = 15/55 (27%), Positives = 23/55 (41%)
Frame = +2
Query: 110 ISVGPALVDTYEPISVGPALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISV 274
+ +G ++ P+SV V V SVGP L + P L Y I++
Sbjct: 325 LEIGTVVIQEMPPVSVSVPTVKILVLQSVGPNLAAVVNILKYFPCLEKLYIKITL 379
>05_03_0113 + 8526595-8527440,8527662-8528357
Length = 513
Score = 26.2 bits (55), Expect = 9.6
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Frame = -1
Query: 307 SHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVG---VNKSRSNRDG--- 146
+ RG F GR R G G GDG G N++ G + + S+ R+G
Sbjct: 82 ARRGGFG-GRPGRSGFGGGACFSQGGDGPAGTNRNNRGEVGGLSGKEGHNSKVTREGAGK 140
Query: 145 -FVGVNKSRSNGDGLV 101
VG +S SNG G +
Sbjct: 141 ELVGGARS-SNGSGAI 155
>03_05_1071 +
30133696-30133874,30134294-30135200,30135224-30135358,
30135545-30136553,30136699-30136703
Length = 744
Score = 26.2 bits (55), Expect = 9.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 224 PISVGPALVDTYEPISVGPAIVEGAPVTVTGADGTPLV 337
P++ GP + P++ GP I GA A G +V
Sbjct: 242 PVAAGPVAQVGHGPVTDGPTIQGGASTAFPPAGGAAVV 279
>01_05_0561 -
23296977-23297174,23297304-23297431,23297990-23298362,
23298629-23299069
Length = 379
Score = 26.2 bits (55), Expect = 9.6
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 327 VPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRA 202
VP+ P T+TG P ++A E+ VS++ E V+ +A
Sbjct: 161 VPNDPATITGDPDSIAALHEIAGRVSSQLKREEGAEVVAEQA 202
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,833,716
Number of Sequences: 37544
Number of extensions: 183456
Number of successful extensions: 754
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 684860244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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