Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5g11
(544 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 200 7e-52
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 200 7e-52
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 107 7e-24
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 58 5e-09
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 44 9e-05
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 39 0.003
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 38 0.004
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 38 0.005
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 37 0.008
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 36 0.014
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 36 0.014
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 36 0.014
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 36 0.025
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 35 0.033
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 35 0.044
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 33 0.13
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 32 0.23
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 32 0.23
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 32 0.23
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 32 0.31
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 31 0.71
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 30 0.94
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 30 0.94
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 30 1.2
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 30 1.2
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 30 1.2
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 29 1.6
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 29 2.2
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 29 2.9
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 28 3.8
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 28 3.8
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z81581-13|CAE17944.1| 166|Caenorhabditis elegans Hypothetical p... 27 6.6
Z81143-8|CAE18064.1| 166|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical p... 27 6.6
Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical pr... 27 8.7
AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 200 bits (487), Expect = 7e-52
Identities = 82/90 (91%), Positives = 85/90 (94%)
Frame = +2
Query: 146 KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA 325
KKRFEVKKW+AVALWAWDI VDNCAICRNHIMDLCIECQANQA+ +ECTVAWG CNHA
Sbjct: 21 KKRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHA 80
Query: 326 FHFHCISRWLKTRQVCPLDNREWEFQKYGH 415
FHFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 81 FHFHCISRWLKTRQVCPLDNREWEFQKYGH 110
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 200 bits (487), Expect = 7e-52
Identities = 82/90 (91%), Positives = 85/90 (94%)
Frame = +2
Query: 146 KKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA 325
KKRFEVKKW+AVALWAWDI VDNCAICRNHIMDLCIECQANQA+ +ECTVAWG CNHA
Sbjct: 12 KKRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHA 71
Query: 326 FHFHCISRWLKTRQVCPLDNREWEFQKYGH 415
FHFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 72 FHFHCISRWLKTRQVCPLDNREWEFQKYGH 101
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 107 bits (256), Expect = 7e-24
Identities = 40/84 (47%), Positives = 57/84 (67%)
Frame = +2
Query: 143 DKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNH 322
+ + F +KKWNA+A+WAWD+ D CAICR H+M+ C+ CQ S S EC V WG CNH
Sbjct: 26 ESRPFVLKKWNALAVWAWDVECDTCAICRVHLMEECLRCQ----SEPSAECYVVWGDCNH 81
Query: 323 AFHFHCISRWLKTRQVCPLDNREW 394
+FH C+++W++ CPL ++W
Sbjct: 82 SFHHCCMTQWIRQNNRCPLCQKDW 105
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 57.6 bits (133), Expect = 5e-09
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +2
Query: 161 VKKWNAVALWAW-DIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFH 337
VKK + W W D C ICR C N ++C + G+C HAFH H
Sbjct: 53 VKKLHVCGEWKWLQGGEDTCGICRMEFESAC-----NMCKFPGDDCPLVLGICRHAFHRH 107
Query: 338 CISRWL-----KTRQVCPLDNREW 394
CI +W+ + R CPL ++W
Sbjct: 108 CIDKWIAAPTNQPRAQCPLCRQDW 131
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 43.6 bits (98), Expect = 9e-05
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 296 TVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 388
TV C +H+HCISRWLK VCP +R
Sbjct: 2120 TVTCDTCTREYHYHCISRWLKINSVCPQCSR 2150
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 43.6 bits (98), Expect = 9e-05
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 296 TVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 388
TV C +H+HCISRWLK VCP +R
Sbjct: 2120 TVTCDTCTREYHYHCISRWLKINSVCPQCSR 2150
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 284 SEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 388
S E T+ C FH C S+W K + VCP NR
Sbjct: 147 STEKTIKCNSCRRRFHLDCASQWFKEKSVCPACNR 181
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +2
Query: 143 DKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNH 322
D++ + +K +A D + +N I +H++ + + T+ TV C H
Sbjct: 59 DRETTDQQKEDATCAICLDNLQNNVDIPEDHVIK-----EELKIDPTTFGTTVIVMPCKH 113
Query: 323 AFHFHCISRWLKTRQVCP 376
FH+ C++ WL+ +Q CP
Sbjct: 114 RFHYFCLTLWLEAQQTCP 131
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCPL 379
CNH FH CI WLKT+ CP+
Sbjct: 256 CNHIFHRPCIEPWLKTKNSCPV 277
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 37.1 bits (82), Expect = 0.008
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 314 CNHAFHFHCISRWL-KTRQVCPLDNRE 391
C H FH +CI WL +TR++CPL R+
Sbjct: 265 CRHVFHCNCIDVWLTQTRKICPLCKRK 291
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 36.3 bits (80), Expect = 0.014
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCP 376
C+H FH HC+ W + +Q CP
Sbjct: 310 CSHVFHAHCLRSWFQRQQTCP 330
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 36.3 bits (80), Expect = 0.014
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 311 VCNHAFHFHCISRWLKTRQVCP 376
VC H +H CIS+W+ T++ CP
Sbjct: 30 VCGHIYHHGCISQWIATKRQCP 51
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 36.3 bits (80), Expect = 0.014
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 251 IECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQVCPLDNREWEFQKY 409
++C ++ S+EC + CNH+F F CIS W+ R CP+ ++ + Y
Sbjct: 66 LQCTICLSTRFSQECRIEG--CNHSFCFSCISEWVCQSLRPSCPMCRKDVDKVSY 118
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 35.5 bits (78), Expect = 0.025
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +2
Query: 254 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN 385
EC + TV C +H C+ +W K +++CP N
Sbjct: 899 ECLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICPTCN 942
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 35.1 bits (77), Expect = 0.033
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCPLDNRE 391
CNH FH CI +WL + CP+ E
Sbjct: 451 CNHVFHPECIYKWLDINKRCPMCREE 476
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 34.7 bits (76), Expect = 0.044
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCPL 379
C H FH C+ +WL + VCPL
Sbjct: 620 CKHYFHGPCLRKWLAVKMVCPL 641
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 254 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCP 376
EC + E TV C +H HC ++WL + CP
Sbjct: 527 ECIICREDIDLENGTVQCPRCTEIYHSHCATQWLSQKPTCP 567
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 32.3 bits (70), Expect = 0.23
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +2
Query: 311 VCNHAFHFHCISRWLKTR---QVCPL 379
+C H F + C+S+WL TR QVCP+
Sbjct: 40 LCGHLFCWPCLSQWLDTRPNNQVCPV 65
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 32.3 bits (70), Expect = 0.23
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCPLDNREWEFQKY 409
C H FH C+ WL +++ CPL + ++ Y
Sbjct: 335 CGHEFHPKCVDPWLLSKRRCPLCQFDVVYKHY 366
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 32.3 bits (70), Expect = 0.23
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +2
Query: 254 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN 385
EC E T+ C +H C +W K +++CP N
Sbjct: 890 ECLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICPTCN 933
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.31
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCPL 379
C H F + C+ WLK++ CP+
Sbjct: 54 CGHTFCYSCLFDWLKSQDTCPM 75
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 30.7 bits (66), Expect = 0.71
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 311 VCNHAFHFHCISRWLKTRQVCPL 379
+CNH H + I+ W +T + CP+
Sbjct: 5021 ICNHGGHVNHIATWFETEKYCPV 5043
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 30.3 bits (65), Expect = 0.94
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 242 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR 364
D+C+ C + A C + G C H FHFHC+ L+ R
Sbjct: 3515 DVCVICFTERLGAAP--C-IRLG-CGHMFHFHCVRMILERR 3551
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 30.3 bits (65), Expect = 0.94
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCPL 379
C H +H CI WL + CP+
Sbjct: 245 CKHIYHKSCIDPWLLEHRTCPM 266
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 29.9 bits (64), Expect = 1.2
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCP 376
C H+FH C+ WL CP
Sbjct: 113 CMHSFHQECVDEWLMKSFTCP 133
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = +2
Query: 254 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCP 376
EC E T+ C +H C +W K +++CP
Sbjct: 518 ECLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICP 558
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 29.9 bits (64), Expect = 1.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCP 376
C FH C ++WL ++ CP
Sbjct: 1044 CRRRFHLECATKWLNEKRECP 1064
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCP 376
C FH C ++WL ++ CP
Sbjct: 1078 CRRRFHLECATKWLNEKRECP 1098
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 29.5 bits (63), Expect = 1.6
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCP 376
C FH C ++WL ++ CP
Sbjct: 753 CRRRFHLKCATKWLNEKRECP 773
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCPLDNRE 391
C H F CI WL + CP+ E
Sbjct: 352 CTHVFCKFCIETWLDQKSTCPICRAE 377
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 VCNHAFHFHCISRWL-KTRQVC 373
+CNH+FH C+ +W T VC
Sbjct: 275 LCNHSFHARCLEQWADNTCPVC 296
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 28.7 bits (61), Expect = 2.9
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCP 376
C FH C ++WL ++ CP
Sbjct: 460 CRRRFHSKCATKWLNEKRECP 480
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 380 LVDKLVESSTNGKYSGNGMHDYK 312
L++ LV+S NG+ SG G + YK
Sbjct: 287 LLNSLVDSGKNGRKSGEGFYKYK 309
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 299 VAWGVCNHAFHFHCISRWLKTRQVCPL 379
V + C H+ C RWL + VCP+
Sbjct: 37 VTFLTCKHSICAGCAGRWLSSCSVCPM 63
>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical
protein R03G5.3 protein.
Length = 1311
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +2
Query: 248 CIECQANQASATSEECTVAWG--VCNHAFHF 334
C +C+ N S S+ CTV +G + N F++
Sbjct: 23 CTDCKINTISDVSKNCTVVYGDIIVNSTFNY 53
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = -1
Query: 481 LIPYVQKMSNSCAGCSSSK*HLMTILLELPFSIV*WTNLSSLQPTGNTVEMECMITNTPS 302
LI V K S++ A CSS HL+++ + + + L+++ T + ++C ++ P+
Sbjct: 36 LITDVAKHSDATANCSSYGGHLISVQNAIDNNA--YLQLAAVSVTPYWLGIKCSLSGNPA 93
Query: 301 NC 296
+C
Sbjct: 94 SC 95
>Z81581-13|CAE17944.1| 166|Caenorhabditis elegans Hypothetical
protein T02E1.8 protein.
Length = 166
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 248 CIECQANQASATSEE-------CT---VAWGVCNHAFHFHCISRWLKT 361
CI+C N A + +E C +A C +A H HCI W +T
Sbjct: 29 CIQCAPNSAWYSEQEEERRIEACRQGLLAPSPCTNATHTHCIVNWYRT 76
>Z81143-8|CAE18064.1| 166|Caenorhabditis elegans Hypothetical
protein T02E1.8 protein.
Length = 166
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 248 CIECQANQASATSEE-------CT---VAWGVCNHAFHFHCISRWLKT 361
CI+C N A + +E C +A C +A H HCI W +T
Sbjct: 29 CIQCAPNSAWYSEQEEERRIEACRQGLLAPSPCTNATHTHCIVNWYRT 76
>Z81075-6|CAB03049.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 27.5 bits (58), Expect = 6.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCP 376
C+H FH C+ WL CP
Sbjct: 350 CSHQFHDWCLMWWLAQDSSCP 370
>Z81070-13|CAB03009.1| 564|Caenorhabditis elegans Hypothetical
protein F26E4.11 protein.
Length = 564
Score = 27.5 bits (58), Expect = 6.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 314 CNHAFHFHCISRWLKTRQVCP 376
C+H FH C+ WL CP
Sbjct: 350 CSHQFHDWCLMWWLAQDSSCP 370
>Z81534-1|CAB04346.1| 284|Caenorhabditis elegans Hypothetical
protein F37H8.1 protein.
Length = 284
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 305 WGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKY 409
W + H HC+ R K +Q LD R+ +K+
Sbjct: 208 WNLQMHVIALHCVGRQYKCKQCDYLDYRKSTMRKH 242
>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
protein Y54E10A.11 protein.
Length = 1446
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = +2
Query: 248 CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT--RQVCPL 379
C C T + + C + FH +C+ +W ++ + CPL
Sbjct: 1395 CTICMMTVHQQTHQLPKIKCKQCKNKFHSNCLYKWFESSNQSTCPL 1440
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,894,601
Number of Sequences: 27780
Number of extensions: 289513
Number of successful extensions: 687
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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