Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5g09
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025470-5|AAB71053.1|  109|Caenorhabditis elegans Hypothetical ...    82   3e-16
Z71262-1|CAA95813.1|  418|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U58757-3|AAC47921.3|  620|Caenorhabditis elegans Hypothetical pr...    27   8.4  
AL032641-4|CAA21647.1|  454|Caenorhabditis elegans Hypothetical ...    27   8.4  

>AF025470-5|AAB71053.1|  109|Caenorhabditis elegans Hypothetical
           protein W10D9.5 protein.
          Length = 109

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 40/93 (43%), Positives = 66/93 (70%), Gaps = 5/93 (5%)
 Frame = +2

Query: 308 EYDDEPD----ETLSERLWGLTEMFPECVRNGTY-TVTTNTWSGIKGLYGLSRSVMWVVA 472
           ++DD PD    ET+ ER+ GL EMFP+ +R+  + TV  + W G+KG++ L++S +WVV+
Sbjct: 7   DFDDIPDSEIHETIVERIEGLGEMFPDALRSAVHSTVDWSIW-GVKGVFSLTKSTIWVVS 65

Query: 473 SSSVILFAPVIFEVERAQVAEMEKSQQKQVLLG 571
           ++S+I F P I E ER+ + + + +QQ+Q+LLG
Sbjct: 66  TTSLIAFLPYIIEKERSDLEKTQVAQQRQMLLG 98


>Z71262-1|CAA95813.1|  418|Caenorhabditis elegans Hypothetical
           protein F22D6.1 protein.
          Length = 418

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +2

Query: 143 NMLMDLTDELELSDSGM--ESLTTSKDDTPERRPEQY 247
           N L+ +TD++++SD G+  +  T   DDT ++ P ++
Sbjct: 274 NCLLSITDQIKISDFGLSDDKRTEMHDDTLDKVPVKW 310


>U58757-3|AAC47921.3|  620|Caenorhabditis elegans Hypothetical
           protein C01B10.10 protein.
          Length = 620

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 347 LWGLTEMFPECVRNGTYTVTTNTW 418
           +W  TE  P C+ N T+T +   W
Sbjct: 69  VWNATEYGPACMSNSTWTQSPQKW 92


>AL032641-4|CAA21647.1|  454|Caenorhabditis elegans Hypothetical
           protein Y5F2A.4 protein.
          Length = 454

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 29  DCSEK*DLKRFLVRTELY*YDNLFTKKN 112
           DC +  DLKR+L + EL  + N+   KN
Sbjct: 8   DCGKTFDLKRYLTKHELRMHKNVVKSKN 35


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,110,705
Number of Sequences: 27780
Number of extensions: 285661
Number of successful extensions: 711
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)