Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5g08
(565 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 61 7e-10
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 46 3e-05
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 41 8e-04
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 41 8e-04
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 40 0.001
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 40 0.001
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 40 0.001
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 40 0.001
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 40 0.001
12_02_1282 + 27528159-27529148,27529549-27529614 40 0.001
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 40 0.001
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 40 0.002
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 33 0.21
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 32 0.27
02_04_0455 - 23082570-23082623,23082706-23083005,23083366-230838... 28 4.5
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 28 5.9
05_03_0482 - 14568108-14568284,14568912-14569970,14570532-145712... 28 5.9
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 27 7.8
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 60.9 bits (141), Expect = 7e-10
Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSN--SKSRIIPNCIMKAKSERRRPFIGSQLD-ECRDASGLFYILPFQ 407
+LDNG K GF + + ++PNC+ K ++ + QL + D +G+ P
Sbjct: 9 VLDNGGGLLKAGFGGDMNPTAVVPNCMAKPPGSKKW-LVADQLQAQDVDVTGMTLRRPID 67
Query: 408 KGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+G+L+N + Q+ VW+ + + V+ N++ L++ EP FN ++Q A E+
Sbjct: 68 RGYLINQEVQREVWERVI-RNLLQVDPNNSSLLLVEPQFNPPALQHATDEL 117
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/95 (28%), Positives = 50/95 (52%)
Frame = +3
Query: 276 SNSKSRIIPNCIMKAKSERRRPFIGSQLDECRDASGLFYILPFQKGFLVNWDTQKTVWDF 455
S+SK+ P + KAK++R+ ++G +L+ RD + I P + G + +WD +W+
Sbjct: 99 SDSKNGAKPMDVDKAKTKRKL-YVGQELEFRRDHMEV--ISPMKDGTVTDWDIVDNIWNH 155
Query: 456 IFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
F + +N + P++I EP N +E E+
Sbjct: 156 AFRQRLL-INPEEHPMLIAEPSTNTGQQREKAAEL 189
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 40.7 bits (91), Expect = 8e-04
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLK 70
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANREKMTQI 124
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 40.7 bits (91), Expect = 8e-04
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 10 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQAKRGILTLK 69
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V D P+++TE N + +E MT+I
Sbjct: 70 YPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEDHPVLLTEAPLNPKANREKMTQI 123
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLK 70
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 124
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLK 70
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 124
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLK 70
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 71 YPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPILLTEAPLNPKANREKMTQI 124
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLK 70
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 124
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLK 70
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 124
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLK 70
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 71 YPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 124
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 10 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLK 69
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 70 YPIEHGIVNNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPMNPKANREKMTQI 123
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASGLFYI- 395
+ DNG K GF+ + + P+ + + + +G + DE + G+ +
Sbjct: 11 VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLK 70
Query: 396 LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
P + G + NWD + +W F E V + P ++TE N + +E MT+I
Sbjct: 71 YPIEHGIVSNWDDMEKIWHHTFYNE-LRVAPEEHPALLTEAPLNPKANREKMTQI 124
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 32.7 bits (71), Expect = 0.21
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 393 ILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQE 545
I P + G ++WD +W+ F + +N + P++I EP N +E
Sbjct: 90 ISPMKDGTFIDWDIVDNIWNHAFRQRLL-INPEEHPMLIVEPSTNTGQQRE 139
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 32.3 bits (70), Expect = 0.27
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 9/123 (7%)
Frame = +3
Query: 216 MSETSCYILDNGAYTAKVGFS--NSKSRIIPNCIMKAKSERRRPFIGSQLDE------CR 371
M + + DNG K GF+ N + + P + + +L + C
Sbjct: 1 MDSGNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACA 60
Query: 372 DASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEA 548
D + P G + +WD +WD F E V+ ++ +++T+P N +E
Sbjct: 61 DLRHQLDVSYPVTNGIVQSWDDMGHIWDHAFYSE-LKVDPSECKILLTDPPLNPVKNREK 119
Query: 549 MTE 557
M E
Sbjct: 120 MIE 122
>02_04_0455 -
23082570-23082623,23082706-23083005,23083366-23083859,
23083953-23084139,23084359-23084394,23084550-23084688,
23085589-23085596
Length = 405
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +3
Query: 123 HPYSNISDPTQEDAHLI*SVITGNL*IKGTKMSETSCYILDNGAYTAKVGFSNSKSRIIP 302
H Y ++ ++D L+ S I+ L K SET ++ A+ A+VG KS
Sbjct: 208 HQYHLGAEEDEKDGELVVSKISYQLHGKQIDKSETGNADEESDAFAARVGPKTPKSNTPQ 267
Query: 303 NCIMK---AKSERRRPFIGSQLDE 365
C +K ++E P + Q +E
Sbjct: 268 PCRLKNSPCETENYDPILEDQDEE 291
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 393 ILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQE 545
I P + G ++WD +W+ FS + P++I EP N +E
Sbjct: 72 ISPMKDGTFIDWDIVDNIWNHAFS-----FYAEEHPMLIVEPSTNTGQQRE 117
>05_03_0482 -
14568108-14568284,14568912-14569970,14570532-14571236,
14571376-14571656,14571748-14571769
Length = 747
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +3
Query: 276 SNSKSRIIPNCIMKAKSERRRPFIGSQLDEC--RDASGLFYILPFQKGFLVNWDT 434
+NS+S N +MKA + R PF Q C D L Y +PF+ ++ W+T
Sbjct: 666 NNSESARKRNKVMKAVQDLRSPF---QRLACYPLDVGTLQYGIPFRVNYMCLWNT 717
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 393 ILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQE 545
I P + G ++WD +W+ FS P + P++I EP N +E
Sbjct: 171 ISPMKDGTFIDWDIVDNIWNHAFS--FYP---EEHPMLIVEPSTNTGQQRE 216
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,510,296
Number of Sequences: 37544
Number of extensions: 260270
Number of successful extensions: 494
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1293275844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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