Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5g08
(565 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 87 6e-18
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 87 6e-18
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 46 2e-05
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 46 2e-05
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 46 2e-05
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 46 2e-05
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 46 2e-05
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 46 2e-05
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 46 2e-05
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 45 4e-05
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 38 0.004
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 38 0.004
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 30 1.3
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 30 1.3
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 30 1.3
U64856-3|AAB04987.1| 392|Caenorhabditis elegans Hypothetical pr... 27 7.0
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr... 27 7.0
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 27 9.3
AJ561221-1|CAD99221.1| 302|Caenorhabditis elegans NAS-33 protei... 27 9.3
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 87.4 bits (207), Expect = 6e-18
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS-RIIPNCIMKAKSERRRPFIGSQLDECRDASGLFYILPFQKG 413
I DNG + K+G +S+S R++PN I+KAK E++R F+ + +EC D LFY+ P ++G
Sbjct: 7 IFDNGGHNMKIGTIDSESPRLVPNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERG 66
Query: 414 FLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
++VNWDTQ+ +W+ F V + + + +T+ + ++ + +EI
Sbjct: 67 YVVNWDTQQQIWEKTFGS--MDVEASTSRIALTDNNYLIPALPDVSSEI 113
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 87.4 bits (207), Expect = 6e-18
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKS-RIIPNCIMKAKSERRRPFIGSQLDECRDASGLFYILPFQKG 413
I DNG + K+G +S+S R++PN I+KAK E++R F+ + +EC D LFY+ P ++G
Sbjct: 7 IFDNGGHNMKIGTIDSESPRLVPNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERG 66
Query: 414 FLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
++VNWDTQ+ +W+ F V + + + +T+ + ++ + +EI
Sbjct: 67 YVVNWDTQQQIWEKTFGS--MDVEASTSRIALTDNNYLIPALPDVSSEI 113
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASG 383
E + ++DNG+ K GF+ + + P+ + + + + +G + DE + G
Sbjct: 4 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 384 LFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ + P + G + NWD + +W F E + + P+++TE N S +E MT+I
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRIAPEEHPVLLTEAPLNPKSNREKMTQI 122
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASG 383
+ + ILDNG+ K GF+ + + P+ + + + + +G + DE + G
Sbjct: 5 DVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ + P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 123
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASG 383
E + ++DNG+ K GF+ + + P+ + + + + +G + DE + G
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ + P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 123
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASG 383
E + ++DNG+ K GF+ + + P+ + + + + +G + DE + G
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ + P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 123
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASG 383
E + ++DNG+ K GF+ + + P+ + + + + +G + DE + G
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ + P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 123
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASG 383
E + ++DNG+ K GF+ + + P+ + + + + +G + DE + G
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ + P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 123
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASG 383
E + ++DNG+ K GF+ + + P+ + + + + +G + DE + G
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ + P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 123
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASG 383
E + ++DNG+ K GF+ + + P+ + + + + +G + DE + G
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ + P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 123
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 44.8 bits (101), Expect = 4e-05
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Frame = +3
Query: 237 ILDNGAYTAKVGFSNSKSRII--PNCIMKAKSERRRP-------FIGSQLDECRDASGLF 389
++DNG+ K GF+ + + N + + K R FIG + + R GLF
Sbjct: 12 VIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNR---GLF 68
Query: 390 YI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEIF 563
I P + G + NW + +W++IF ++ + + P+++T+ N +E EIF
Sbjct: 69 SIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIF 127
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 44.4 bits (100), Expect = 6e-05
Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFSNSKS--RIIPNCIMKAKSERRRPFIGSQL----DECRDASG 383
+ + ++DNG+ K GF+ + + P+ + + + + +G + DE + G
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ + P + G + NWD + +W F E V + P+++TE N + +E MT+I
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQI 123
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 44.4 bits (100), Expect = 6e-05
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Frame = +3
Query: 237 ILDNGAYTAKVGFS--NSKSRIIPNCIMK---------AKSERRRPFIGSQLDECRDASG 383
++DNG K G++ N + I P+ + + E + +G + + R
Sbjct: 10 VVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQMLD 69
Query: 384 LFYILPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFASIQEAMTEI 560
+ Y P G + NWD VWD F E ++ + L++TEP N S +E M ++
Sbjct: 70 INY--PMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQV 126
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 360 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFAS 536
DE + G+ + P + G + NWD + +W F E V + P+++TE N +
Sbjct: 13 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKA 71
Query: 537 IQEAMTEI 560
+E MT+I
Sbjct: 72 NREKMTQI 79
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 360 DECRDASGLFYI-LPFQKGFLVNWDTQKTVWDFIFSKECCPVNFNDTPLIITEPLFNFAS 536
DE + G+ + P + G + NWD + +W F E V + P+++TE N +
Sbjct: 43 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKA 101
Query: 537 IQEAMTEI 560
+E MT+I
Sbjct: 102 NREKMTQI 109
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFS--NSKSRIIPNCIMKAKSERRRPFIGSQ----LDECRDASG 383
E + ++DNG+ K GF+ ++ + P+ + + + + +G + DE + G
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTV 446
+ + P + G + NWD + +
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Frame = +3
Query: 222 ETSCYILDNGAYTAKVGFS--NSKSRIIPNCIMKAKSERRRPFIGSQ----LDECRDASG 383
E + ++DNG+ K GF+ ++ + P+ + + + + +G + DE + G
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 384 LFYI-LPFQKGFLVNWDTQKTV 446
+ + P + G + NWD + +
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Frame = +2
Query: 83 YLKLPK*ITFPFCTSLQ*YFRPNSR---RCTSN--LISNHR*PLNKRYENERDLLLYIGQ 247
Y + K I C ++ Y R N+R +C + + N+ + K YE E LLY+
Sbjct: 966 YNFIEKGIRGGICNAMLRYSRANNRHLKKCNTEEESLKNYEEEILKNYEEESIYLLYLDA 1025
Query: 248 RSLYG 262
+LYG
Sbjct: 1026 NNLYG 1030
>U64856-3|AAB04987.1| 392|Caenorhabditis elegans Hypothetical
protein T25F10.4 protein.
Length = 392
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 453 FIFSKECCPVNFNDTPLIITEPLFNFA 533
FIF CCP+ + TP + P F+
Sbjct: 279 FIFHLRCCPIESDPTPPLFPSPSDQFS 305
>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
protein K02A2.3 protein.
Length = 1020
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 417 LVNWDTQKTVWDFI-FSKECCPVNFNDTPLIITEPLFNFASIQEAMT 554
L+NW +K + + F++E ND LI+T+ + +F E +T
Sbjct: 729 LLNWPNEKNPDELVLFAEEIIHGAANDNCLIVTKGITDFPEYSERLT 775
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 356 LRAYERAASLRFRLHNAIRYYPGFGIGEANFSRIG 252
LR YER +RF L+ Y F GE +S +G
Sbjct: 225 LRHYERNTCIRFSLNGGGSDYLVFSKGEGCYSSVG 259
>AJ561221-1|CAD99221.1| 302|Caenorhabditis elegans NAS-33 protein
protein.
Length = 302
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 356 LRAYERAASLRFRLHNAIRYYPGFGIGEANFSRIG 252
LR YER +RF L+ Y F GE +S +G
Sbjct: 79 LRHYERNTCIRFSLNGGGSDYLVFSKGEGCYSSVG 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,040,096
Number of Sequences: 27780
Number of extensions: 240404
Number of successful extensions: 494
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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