Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5f24
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein. 252 1e-66
BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein. 252 1e-66
AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens ... 252 1e-66
AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein. 252 1e-66
AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein. 251 2e-66
BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein. 213 6e-55
AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens ... 32 1.9
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 32 1.9
D32257-1|BAA06988.1| 423|Homo sapiens Xenopus transcription fac... 31 3.3
BC013882-1|AAH13882.2| 583|Homo sapiens EYA2 protein protein. 31 4.3
EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel prot... 30 7.6
EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel prot... 30 7.6
DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein ... 30 7.6
AF023456-1|AAB82796.1| 753|Homo sapiens protein phosphatase wit... 30 7.6
>BC072016-1|AAH72016.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 252 bits (616), Expect = 1e-66
Identities = 124/181 (68%), Positives = 139/181 (76%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 S 616
S
Sbjct: 179 S 179
>BC010106-1|AAH10106.1| 466|Homo sapiens CS protein protein.
Length = 466
Score = 252 bits (616), Expect = 1e-66
Identities = 124/181 (68%), Positives = 139/181 (76%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 S 616
S
Sbjct: 179 S 179
>AK074956-1|BAC11314.1| 466|Homo sapiens protein ( Homo sapiens
cDNA FLJ90475 fis, clone NT2RP3002721, highly similar to
Porcine citrate synthase mRNA. ).
Length = 466
Score = 252 bits (616), Expect = 1e-66
Identities = 124/181 (68%), Positives = 139/181 (76%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 S 616
S
Sbjct: 179 S 179
>AF053631-1|AAQ13428.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 252 bits (616), Expect = 1e-66
Identities = 124/181 (68%), Positives = 139/181 (76%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 S 616
S
Sbjct: 179 S 179
>AF047042-1|AAC25560.1| 466|Homo sapiens citrate synthase protein.
Length = 466
Score = 251 bits (614), Expect = 2e-66
Identities = 124/181 (68%), Positives = 139/181 (76%)
Frame = +2
Query: 74 MALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIREFRKKHGST 253
MAL + L +C + R SA TNLK IL + IPKEQ +I+ FR++HG T
Sbjct: 1 MALLTAAARLLGTKNASC--LVLAARHASASSTNLKDILADLIPKEQARIKTFRQQHGKT 58
Query: 254 KVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPEG 433
VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPEG
Sbjct: 59 VVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPEG 118
Query: 434 LFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNSE 613
LFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNSE
Sbjct: 119 LFWLLVTGCIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNSE 178
Query: 614 S 616
S
Sbjct: 179 S 179
>BC000105-1|AAH00105.3| 409|Homo sapiens CS protein protein.
Length = 409
Score = 213 bits (519), Expect = 6e-55
Identities = 100/122 (81%), Positives = 107/122 (87%)
Frame = +2
Query: 251 TKVGEVTVDMMYGGMRGIKGLVWETSVLDADEGIRFRGLSIPECQQQLPKAKGGEEPLPE 430
T VG++TVDMMYGGMRG+KGLV+ETSVLD DEGIRFRG SIPECQ+ LPKAKGGEEPLPE
Sbjct: 1 TVVGQITVDMMYGGMRGMKGLVYETSVLDPDEGIRFRGFSIPECQKLLPKAKGGEEPLPE 60
Query: 431 GLFWLLVTGDIPTEAQAKALSKEWAARAELPAHVVTMLNNMPGKLHPMSQFSAAVTALNS 610
GLFWLLVTG IPTE Q LSKEWA RA LP+HVVTML+N P LHPMSQ SAAVTALNS
Sbjct: 61 GLFWLLVTGHIPTEEQVSWLSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAVTALNS 120
Query: 611 ES 616
ES
Sbjct: 121 ES 122
>AK128517-1|BAC87476.1| 901|Homo sapiens protein ( Homo sapiens
cDNA FLJ46675 fis, clone TRACH3009701, weakly similar
to Homo sapiens dynein, axonemal, heavy polypeptide 9
(DNAH9). ).
Length = 901
Score = 31.9 bits (69), Expect = 1.9
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 8 VCDRSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 187
+ R + + LC +R+ L L+R+ + + + A L+ Q L+ +
Sbjct: 123 IIGRVSLAAKSLCMWVRAMELYGRLYRVVEPKRIRMNAALAQLREKQAALAEAQEKLREV 182
Query: 188 LQ--EKIPKE-QEKI---REFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 349
+ E + K+ EK+ E RKK ++ M+ G+ G K WE +V +E
Sbjct: 183 AEKLEMLKKQYDEKLAQKEELRKKSEEMELKLERAGMLVSGLAGEKAR-WEETVQGLEED 241
Query: 350 IRF 358
+ +
Sbjct: 242 LGY 244
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 31.9 bits (69), Expect = 1.9
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Frame = +2
Query: 8 VCDRSRASCRDLCGSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSI 187
+ R + + LC +R+ L L+R+ + + + A L+ Q L+ +
Sbjct: 3222 IIGRVSLAAKSLCMWVRAMELYGRLYRVVEPKRIRMNAALAQLREKQAALAEAQEKLREV 3281
Query: 188 LQ--EKIPKE-QEKI---REFRKKHGSTKVGEVTVDMMYGGMRGIKGLVWETSVLDADEG 349
+ E + K+ EK+ E RKK ++ M+ G+ G K WE +V +E
Sbjct: 3282 AEKLEMLKKQYDEKLAQKEELRKKSEEMELKLERAGMLVSGLAGEKAR-WEETVQGLEED 3340
Query: 350 IRF 358
+ +
Sbjct: 3341 LGY 3343
>D32257-1|BAA06988.1| 423|Homo sapiens Xenopus transcription factor
IIIA homologue protein.
Length = 423
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 399 RLRVEKNHYPKVFSGFSSLAIYPPKRKLKRCLKNGQRGRS 518
+L+V+K+ + F G SS IYPPKRK + L Q G S
Sbjct: 367 KLKVKKSREKREF-GLSSQWIYPPKRKQGQGLSLCQNGES 405
>BC013882-1|AAH13882.2| 583|Homo sapiens EYA2 protein protein.
Length = 583
Score = 30.7 bits (66), Expect = 4.3
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +3
Query: 192 RKRFPRNKRRSANSERSMVPLKSERSQ--LI*CTVACVESKVWFGKPLCWMPMKESVS-V 362
R++ PR RR +R ++ RSQ L+ A ++ G+PL KE V V
Sbjct: 71 RRQQPRQPRRRRQRQRQRQQ-RARRSQPGLVGPAPARPPARTASGRPLHCARYKEMVELV 129
Query: 363 VYPSLSANSNC 395
+ PSL+ NS+C
Sbjct: 130 ISPSLTVNSDC 140
>EF629347-1|ABR15764.1| 1998|Homo sapiens Nav1.5 Na+ channel protein.
Length = 1998
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 383 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 502
QQ+ GG E P+ W V+ +EA+A A +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115
>EF629346-1|ABR15763.1| 2016|Homo sapiens Nav1.5 Na+ channel protein.
Length = 2016
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 383 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 502
QQ+ GG E P+ W V+ +EA+A A +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115
>DQ784809-1|ABQ01244.1| 2016|Homo sapiens sodium channel protein type
V alpha subunit protein.
Length = 2016
Score = 29.9 bits (64), Expect = 7.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 383 QQQLPKAKGGEEPLPEGLFWLLVTGDIPTEAQAKALSKEW 502
QQ+ GG E P+ W V+ +EA+A A +W
Sbjct: 1076 QQESQPVSGGPEAPPDSRTWSQVSATASSEAEASASQADW 1115
>AF023456-1|AAB82796.1| 753|Homo sapiens protein phosphatase with
EF-hands-2 long form protein.
Length = 753
Score = 29.9 bits (64), Expect = 7.6
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Frame = +2
Query: 47 GSLRSAALKMALFRITSSRLVELQKACPTATVLLRGLSAEQTNLKSILQEKIPKEQEKIR 226
GS R A +K+ + K T T+ R E++ L+++ ++ + +
Sbjct: 516 GSNRGAYVKLGPALTPHIVQYQANKVTHTLTMRQRISRVEESALRALREKLFAHSSDLLS 575
Query: 227 EFRKKHGSTKVGEVTVDMMYGGMRGI--KGLVW 319
EF KKH + KVG +T+ + + GL W
Sbjct: 576 EF-KKHDADKVGLITLSDWAAAVESVLHLGLPW 607
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,474,188
Number of Sequences: 237096
Number of extensions: 1878160
Number of successful extensions: 6382
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6382
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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