Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5f21
         (486 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   1.0  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   2.4  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   7.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    22   9.7  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    22   9.7  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -1

Query: 450 VPIGNIIYINLFKIQILVDMYSIFNL 373
           +P G + YI +  + +L+ +YS+FN+
Sbjct: 688 LPAGLVYYITIPSMYMLLVIYSVFNM 713


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +2

Query: 326 PTIPLEFLCKIVFSHVRLNIEYISTSICILNKLM*IMLPIGTI 454
           PT+ + FLC +VF       E ++  I IL  L+  +L +  I
Sbjct: 242 PTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKI 284


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 314 QCGCPTIP 337
           QCGCP IP
Sbjct: 342 QCGCPDIP 349


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 47  WWYLPVRTHKTSYHQ 3
           W+ LP +   +SYHQ
Sbjct: 160 WYQLPQQQQPSSYHQ 174


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 9.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -3

Query: 100 PHPSNRNALLLHGRTRQGGGTY 35
           P PS+ +    HG T  GGG Y
Sbjct: 220 PAPSHLSDHSSHGGTSGGGGCY 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,125
Number of Sequences: 2352
Number of extensions: 8637
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)