Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5f16
         (194 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54CC3 Cluster: Putative uncharacterized protein; n=1; ...    33   0.93 
UniRef50_UPI00015B4C34 Cluster: PREDICTED: similar to conserved ...    31   3.7  
UniRef50_Q4SP28 Cluster: Chromosome 15 SCAF14542, whole genome s...    31   3.7  
UniRef50_Q5CWP7 Cluster: Putative uncharacterized protein; n=3; ...    31   6.5  
UniRef50_A5K8H3 Cluster: Variable surface protein Vir24-related;...    31   6.5  
UniRef50_A5K0P4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_A2G1U3 Cluster: Putative uncharacterized protein; n=2; ...    30   8.6  

>UniRef50_Q54CC3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 702

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +3

Query: 78  QSNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           QSN++ +IPNS+ L   +++ +NC NN +
Sbjct: 503 QSNQLTSIPNSIGLNCVNLISINCSNNQL 531


>UniRef50_UPI00015B4C34 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 648

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 187 FTKTCYLLIE-LLQQFKNTMSYKNKNKLLGIFT 92
           F +T  + +E LLQ FKN+M+  N N L+GI T
Sbjct: 513 FVQTLVMNLEGLLQVFKNSMTESNYNALIGILT 545


>UniRef50_Q4SP28 Cluster: Chromosome 15 SCAF14542, whole genome
           shotgun sequence; n=8; Clupeocephala|Rep: Chromosome 15
           SCAF14542, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 227

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 81  SNEIVNIPNSLFLFLYDIVFLNCCNNSINK 170
           +N IV +P     +L D+V+L+C NNS+ +
Sbjct: 71  NNRIVELPPLALNYLSDLVYLDCSNNSLTE 100


>UniRef50_Q5CWP7 Cluster: Putative uncharacterized protein; n=3;
            Cryptosporidium|Rep: Putative uncharacterized protein -
            Cryptosporidium parvum Iowa II
          Length = 953

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
 Frame = +3

Query: 51   VSSHKLQNNQ---SNEIVNIPNSLFLFLYDIVFLNCCNNSINK*HVFVKKK 194
            +  HK  NN+    NEIV++ N+LF+ + +    +  NN++ + +  +K+K
Sbjct: 896  IQDHKQNNNEVPVGNEIVSLNNALFMIISNTTIESSSNNNLLEWYNSLKQK 946


>UniRef50_A5K8H3 Cluster: Variable surface protein Vir24-related;
           n=1; Plasmodium vivax|Rep: Variable surface protein
           Vir24-related - Plasmodium vivax
          Length = 575

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 12/46 (26%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = +3

Query: 60  HKLQNNQSNEIVN-IPNSLFLFLYDIVFLNCCNNSINK*HVFVKKK 194
           + L+NN++  +V+ + ++L+ F+Y++    C NN + K  +++ K+
Sbjct: 358 NNLENNENIFVVDKLIDALYKFIYELKLYECFNNPLEKNDIYMLKE 403


>UniRef50_A5K0P4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1747

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 45  AAVSSHKLQNNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           A  +S  L NN   EI ++P  L +F   +  L+ CN+S+
Sbjct: 267 ACTTSSLLLNNNKGEIQHLPKPLSVFYLPLSKLDLCNDSV 306


>UniRef50_A2G1U3 Cluster: Putative uncharacterized protein; n=2;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 337

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 63  KLQNNQSNEIVNIPNSLFLFLYDIVFLNCCNNSIN 167
           K+ NN +N  V++ N   +FL+  +F NC  + IN
Sbjct: 28  KIINNTNNATVSLSNKNEVFLFQCMFRNCLASIIN 62


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,672,896
Number of Sequences: 1657284
Number of extensions: 2358177
Number of successful extensions: 6402
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6401
length of database: 575,637,011
effective HSP length: 44
effective length of database: 502,716,515
effective search space used: 10054330300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)