Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5f16
         (194 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016048-1|AAH16048.1|  317|Homo sapiens LRRC38 protein protein.       29   2.6  
AL603749-2|CAH70436.1|  294|Homo sapiens leucine rich repeat con...    29   2.6  
AL354712-1|CAI21926.1|  294|Homo sapiens leucine rich repeat con...    29   2.6  
U80184-1|AAC02796.1| 1269|Homo sapiens FLII protein.                   28   6.1  
U01184-1|AAC03568.1| 1268|Homo sapiens flightless-I homolog prot...    28   6.1  
BC087849-1|AAH87849.1|  259|Homo sapiens LRRC3B protein protein.       28   6.1  
BC067784-1|AAH67784.1|  259|Homo sapiens leucine rich repeat con...    28   6.1  
BC040656-1|AAH40656.1|  259|Homo sapiens LRRC3B protein protein.       28   6.1  
BC025300-1|AAH25300.1| 1269|Homo sapiens flightless I homolog (D...    28   6.1  
AY358282-1|AAQ88649.1|  259|Homo sapiens NLVD195 protein.              28   6.1  
AF396933-1|AAK84157.1|  259|Homo sapiens LRP15 protein.                28   6.1  
AB208864-1|BAD92101.1| 1101|Homo sapiens flightless I homolog va...    28   6.1  

>BC016048-1|AAH16048.1|  317|Homo sapiens LRRC38 protein protein.
          Length = 317

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 84  NEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           N I  IP   F+F  D+V+L+  NNS+
Sbjct: 89  NRIQRIPEDFFIFYGDLVYLDFRNNSL 115


>AL603749-2|CAH70436.1|  294|Homo sapiens leucine rich repeat
           containing 38 protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 84  NEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           N I  IP   F+F  D+V+L+  NNS+
Sbjct: 66  NRIQRIPEDFFIFYGDLVYLDFRNNSL 92


>AL354712-1|CAI21926.1|  294|Homo sapiens leucine rich repeat
           containing 38 protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 84  NEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           N I  IP   F+F  D+V+L+  NNS+
Sbjct: 66  NRIQRIPEDFFIFYGDLVYLDFRNNSL 92


>U80184-1|AAC02796.1| 1269|Homo sapiens FLII protein.
          Length = 1269

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 72  NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           N   N I  IPN LF+ L D+++L+   N +
Sbjct: 133 NLSHNSIDTIPNQLFINLTDLLYLDLSENRL 163


>U01184-1|AAC03568.1| 1268|Homo sapiens flightless-I homolog
           protein.
          Length = 1268

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 72  NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           N   N I  IPN LF+ L D+++L+   N +
Sbjct: 132 NLSHNSIDTIPNQLFINLTDLLYLDLSENRL 162


>BC087849-1|AAH87849.1|  259|Homo sapiens LRRC3B protein protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 81  SNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           SN+I +IPN +F  L+ +  LN   N I
Sbjct: 73  SNQITSIPNEIFKDLHQLRVLNLSKNGI 100


>BC067784-1|AAH67784.1|  259|Homo sapiens leucine rich repeat
           containing 3B protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 81  SNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           SN+I +IPN +F  L+ +  LN   N I
Sbjct: 73  SNQITSIPNEIFKDLHQLRVLNLSKNGI 100


>BC040656-1|AAH40656.1|  259|Homo sapiens LRRC3B protein protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 81  SNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           SN+I +IPN +F  L+ +  LN   N I
Sbjct: 73  SNQITSIPNEIFKDLHQLRVLNLSKNGI 100


>BC025300-1|AAH25300.1| 1269|Homo sapiens flightless I homolog
           (Drosophila) protein.
          Length = 1269

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 72  NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           N   N I  IPN LF+ L D+++L+   N +
Sbjct: 133 NLSHNSIDTIPNQLFINLTDLLYLDLSENRL 163


>AY358282-1|AAQ88649.1|  259|Homo sapiens NLVD195 protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 81  SNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           SN+I +IPN +F  L+ +  LN   N I
Sbjct: 73  SNQITSIPNEIFKDLHQLRVLNLSKNGI 100


>AF396933-1|AAK84157.1|  259|Homo sapiens LRP15 protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 81  SNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           SN+I +IPN +F  L+ +  LN   N I
Sbjct: 73  SNQITSIPNEIFKDLHQLRVLNLSKNGI 100


>AB208864-1|BAD92101.1| 1101|Homo sapiens flightless I homolog
           variant protein.
          Length = 1101

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 72  NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 164
           N   N I  IPN LF+ L D+++L+   N +
Sbjct: 120 NLSHNSIDTIPNQLFINLTDLLYLDLSENRL 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,502,962
Number of Sequences: 237096
Number of extensions: 303898
Number of successful extensions: 464
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 76,859,062
effective HSP length: 44
effective length of database: 66,426,838
effective search space used: 1328536760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)