Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5f16
         (194 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   1.0  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    20   2.3  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    20   2.3  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    20   3.1  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    19   5.4  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          19   5.4  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      19   5.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    19   7.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    18   9.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    18   9.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    18   9.4  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 96  NIPNSLFLFLYDIVFLNCCNNSINK*HVFV 185
           N+ N  F  +  ++ L C +  +NK  VF+
Sbjct: 51  NVINPFFCDMSPLLSLVCADTRLNKLAVFI 80


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 175 CYLLIELLQQFKNTMSYKN 119
           C+LL E+  + K T  Y N
Sbjct: 12  CFLLGEVFSEDKYTTKYDN 30


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 175 CYLLIELLQQFKNTMSYKN 119
           C+LL E+  + K T  Y N
Sbjct: 12  CFLLGEVFSEDKYTTKYDN 30


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 96  NIPNSLFLFLYDIVFLNCCNNSINK*HVFV 185
           N+ N  F  +   + L C +  +NK  VF+
Sbjct: 52  NVINPFFCDMSPSLSLLCADTRLNKLAVFI 81


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 97  IYLIACFCF 123
           IYL+ CF F
Sbjct: 306 IYLVMCFVF 314


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -1

Query: 122 KQKQAIRYIHY 90
           K   A+RY HY
Sbjct: 163 KNTSAVRYTHY 173


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 116 KQAIRYIHYFVRLIILQLMRRDGGDN 39
           K A RYI +  +++   +   +G D+
Sbjct: 295 KLATRYIDFLFQVLHCNMENTEGADD 320


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 133 MSYKNKNKLLGIFTISF 83
           +S K   + L IFTISF
Sbjct: 365 ISSKKDRQELWIFTISF 381


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 43  IIYKIYNILYNR 8
           +IY I+N+ Y R
Sbjct: 379 LIYTIFNLDYRR 390


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 43  IIYKIYNILYNR 8
           +IY I+N+ Y R
Sbjct: 379 LIYTIFNLDYRR 390


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 43  IIYKIYNILYNR 8
           +IY I+N+ Y R
Sbjct: 379 LIYTIFNLDYRR 390


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,431
Number of Sequences: 438
Number of extensions: 822
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2541420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)