Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5f12
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   3.3  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            24   4.4  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   7.6  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -1

Query: 533 TVVPVVEASLPVAVVSGALNLSAAAMVACVDKSSILASPK 414
           T   VV A LPV VVS AL       +  +   S+ A P+
Sbjct: 52  TAAVVVNADLPVKVVSKALKGLMVVDIGDMRVVSVYAPPR 91


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 510 VIASGCGLWCLESLCCSHGG 451
           V A G  LW L S C  HGG
Sbjct: 316 VYACGLVLWELVSRCTVHGG 335


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -1

Query: 368 LMTKRMFFDFLIVTLSTPCTGXRPSLLIIFLAFFSP 261
           L+   +   FLI T +T     +P++L+I L  F P
Sbjct: 8   LLLSLLCLTFLISTTATQRPPDQPNVLLIILDDFRP 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.129    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,057
Number of Sequences: 2352
Number of extensions: 9810
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)