Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5f01
(600 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 200 7e-52
10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 69 2e-12
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 69 3e-12
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 59 3e-09
09_04_0028 - 13928542-13929538,13929736-13929818 58 4e-09
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 58 5e-09
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 58 5e-09
09_04_0031 + 13946692-13946774,13947007-13948012 57 9e-09
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 57 1e-08
04_02_0018 - 8595479-8595678,8595782-8595935,8596396-8597032,859... 56 2e-08
09_04_0029 - 13932414-13933416,13933821-13933903 55 4e-08
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 55 5e-08
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 55 5e-08
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 54 7e-08
09_04_0030 + 13940168-13940250,13940703-13941714 53 2e-07
04_03_0562 + 17190443-17190520,17190715-17190853,17190943-171910... 52 3e-07
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 52 5e-07
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 51 6e-07
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 50 1e-06
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 49 2e-06
11_06_0432 + 23448482-23448570,23448987-23449100,23449514-234495... 47 1e-05
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 47 1e-05
04_03_0559 + 17118319-17118396,17119329-17119467,17119569-171196... 44 7e-05
04_03_0566 + 17209455-17209565,17210159-17210203,17211456-172115... 44 1e-04
08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 42 4e-04
03_01_0012 - 101584-101898,102274-102531,102932-103474 41 7e-04
09_04_0636 + 19150966-19151037,19151150-19151291,19151404-191514... 40 0.002
04_03_0629 + 18179065-18179148,18180146-18180287,18180987-181810... 40 0.002
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940... 40 0.002
09_04_0641 + 19172370-19172459,19172539-19172680,19172951-191730... 39 0.003
06_03_1023 - 26952195-26952635,26952723-26952934,26953038-269537... 33 0.23
03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 31 0.53
03_05_0059 - 20359480-20359552,20359690-20359777,20360255-203603... 29 3.8
12_01_0816 + 7502669-7503145 28 6.6
12_02_0067 + 13144002-13144203,13144471-13144529,13144638-131447... 27 8.7
06_01_0900 + 6926600-6927202 27 8.7
03_06_0485 + 34242121-34243188 27 8.7
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 200 bits (488), Expect = 7e-52
Identities = 96/206 (46%), Positives = 133/206 (64%), Gaps = 23/206 (11%)
Frame = +3
Query: 51 DNLTALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMI 230
+N+ A L N L+++ +P + +V +RM VGICGSDVHY ++ + HFV++EPM+
Sbjct: 22 ENMAAWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMV 81
Query: 231 MGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPPVHG 410
+GHE +GV+ ++GS V +L VGDRVA+EPG+ C C CK GRY+LC DM F ATPPVHG
Sbjct: 82 IGHECAGVIEEVGSGVTHLAVGDRVALEPGISCWRCRHCKGGRYNLCEDMKFFATPPVHG 141
Query: 411 NLVRYYK-----------------------HAADFCFKLPDHVTMEEGALLEPLAVGIHA 521
+L H D CFKLP++V++EEGA+ EPL+VG+HA
Sbjct: 142 SLANQASKQFSSISISLQEEDAILINVVIVHPGDLCFKLPENVSLEEGAMCEPLSVGVHA 201
Query: 522 CKRGGVSAGHVVLVLGAGPIGLLTML 599
C+R V VL++GAGPIGL+T+L
Sbjct: 202 CRRADVGPETGVLIMGAGPIGLVTLL 227
>10_02_0173 +
6191676-6191764,6192147-6192260,6192411-6192638,
6192898-6193183,6193350-6193500,6193615-6193811
Length = 354
Score = 69.3 bits (162), Expect = 2e-12
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Frame = +3
Query: 117 ISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVG 296
+ D+V LR+ G+C +DV W + + + P++ GHE +GVV ++G+ VK+ VG
Sbjct: 32 VQSDDVSLRITHCGVCYADVA-WTRNILNNSMY--PLVPGHEIAGVVTEVGADVKSFKVG 88
Query: 297 DRVAIEPGV-PCRYCEFCKTGRYHLCPDMIFCAT-PPVHGNLVR--YYKHAA---DFCFK 455
D V + V CR CE C + + C +F G + + Y H +CFK
Sbjct: 89 DHVGVGTYVNSCRDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFK 148
Query: 456 LPDHVTMEEGALLEPLAVGIHA--CKRGGVSAGHVVLVLGAGPIG 584
+PD +E+ A L + +++ + G + V+G G +G
Sbjct: 149 IPDGYPLEKAAPLLCAGITVYSPMMRHNMNQPGKSLGVIGLGGLG 193
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 68.9 bits (161), Expect = 3e-12
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Frame = +3
Query: 123 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 302
+D+V +++ GIC SD+H K + H + P++ GHE +GVV ++G V GDR
Sbjct: 40 DDDVAIKILFCGICHSDLHCI-KNEWKHSIY--PLVPGHEIAGVVTEVGKNVTRFKAGDR 96
Query: 303 VAIEPGV-PCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAA------DFCFKLP 461
V + V CR CE C G + CP+ +F V Y +++ F P
Sbjct: 97 VGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFP 156
Query: 462 DHVTMEEGALLEPLAVGIHA-CKRGGVSA-GHVVLVLGAGPIG 584
+ + ++ GA L + ++ K G++A G V VLG G +G
Sbjct: 157 EAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLG 199
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 75 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 251
KP + V+ P+ E V +++ +C +DV++W+ KGQ F P I+GHEA G
Sbjct: 20 KPLSIEEVEVAPPQAME--VRVKILYTALCHTDVYFWEAKGQTPVF----PRILGHEAGG 73
Query: 252 VVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 371
+V +G V L GD V C+ C+ CK+ ++C
Sbjct: 74 IVESVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMC 113
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 58.4 bits (135), Expect = 4e-09
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +3
Query: 123 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 302
ED+V +++ GIC +D+H K + G+ + P++ GHE GVVA +G+ V GD
Sbjct: 32 EDDVTIKVLYCGICHTDLHTI-KNEWGNAMY--PVVPGHEIVGVVAGVGAGVTRFKAGDT 88
Query: 303 VAIEPGV-PCRYCEFCKTGRYHLCPDMIFCATPPVHG 410
V + V CR C+ C G + CP M+ + +G
Sbjct: 89 VGVGYFVDSCRACDSCGKGDENYCPTMVITSNGTDYG 125
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 58.0 bits (134), Expect = 5e-09
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Frame = +3
Query: 123 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 302
+D+V++++ GIC SD+H K + + P++ GHE +GVV + G V GD+
Sbjct: 30 DDDVVIKILYCGICHSDLHSI-KNEWKNATY--PLVPGHEIAGVVTEAGKNVTKFKGGDK 86
Query: 303 VAIEPGV-PCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAA------DFCFKLP 461
V + V C C+ C G + CP +IF V Y +++ F + P
Sbjct: 87 VGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFP 146
Query: 462 DHVTMEEGALLEPLAVGIHA-CKRGGVSA-GHVVLVLGAGPIG 584
+ + +++GA L + +++ K G++ V VLG G +G
Sbjct: 147 EAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLG 189
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 75 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 251
+P + VQ P+ E V +++ +C +D + W K G F P I+GHEA+G
Sbjct: 22 RPMTIEDVQVAPPQAGE--VRVKILFTALCHTDHYTWSGKDPEGLF----PCILGHEAAG 75
Query: 252 VVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 371
+V +G V + GD V CR C+FCK+G+ +LC
Sbjct: 76 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC 115
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 57.2 bits (132), Expect = 9e-09
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +3
Query: 123 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 302
ED+V +++ GIC +D+H K + G+ + P++ GHE GVV +G+ V GD
Sbjct: 32 EDDVTIKVLYCGICHTDLHII-KNEWGNAMY--PVVPGHEIVGVVTGVGAGVTKFKAGDT 88
Query: 303 VAIEPGV-PCRYCEFCKTGRYHLCPDMIFCATPPVHG 410
V + V CR C+ C G + CP M+ + +G
Sbjct: 89 VGVGYFVDSCRACDSCGKGYENYCPTMVITSNGTDYG 125
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Frame = +3
Query: 75 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 251
KP + V+ P+ E V +++ +C +DV++W+ KGQ F P I GHEA G
Sbjct: 20 KPLVIEEVEVAPPQAME--VRVKILFTSLCHTDVYFWEAKGQTPVF----PRIFGHEAGG 73
Query: 252 VVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 371
+V +G V +L GD V C+ C CK+ ++C
Sbjct: 74 IVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMC 113
>04_02_0018 -
8595479-8595678,8595782-8595935,8596396-8597032,
8597126-8597217
Length = 360
Score = 56.4 bits (130), Expect = 2e-08
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Frame = +3
Query: 126 DEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 305
D+V +++ G+C +D+H+ G + P++ GHE +GVV K+G+ V VGDRV
Sbjct: 36 DDVTIKVKYCGMCHTDLHFIHN-DWG--ITMYPVVPGHEITGVVTKVGTNVAGFKVGDRV 92
Query: 306 AIE-PGVPCRYCEFCKTGRYHLCPDM------IFCATPPVHGNLVRYYKHAADFCFKLPD 464
+ C CE C+ + C + IF +G F ++PD
Sbjct: 93 GVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPD 152
Query: 465 HVTMEEGALLEPLAVGIHA-CKRGGV----SAGHVVLVLGAGPIG 584
+ ++ A L + +++ K+ G+ +AG + V+G G +G
Sbjct: 153 TLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGGLG 197
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +3
Query: 123 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 302
+D+V +++ GIC +D+H K G+ + P++ GHE GVV +G+ V GD
Sbjct: 32 DDDVTIKVLYCGICHTDLHV-VKNDWGNAMY--PVVPGHEIVGVVTGVGAGVTKFKAGDT 88
Query: 303 VAIEPGV-PCRYCEFCKTGRYHLCPDMIFCATPPVHG 410
V + V CR C+ C G + CP M+ + +G
Sbjct: 89 VGVGFFVGSCRTCDSCGKGYENYCPTMVITSNGKDYG 125
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +3
Query: 75 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 251
KP + V+ P+ E V L++ +C +DV++W+ KGQ F P I GHEA G
Sbjct: 20 KPLSIEEVEVAPPQAME--VRLKILYTALCHTDVYFWEAKGQTPVF----PRIFGHEAGG 73
Query: 252 VVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 371
+V +G V L+ GD V C C C + +LC
Sbjct: 74 IVESVGEGVTELSPGDHVLPVFTGECGDCRHCLSEESNLC 113
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 54.8 bits (126), Expect = 5e-08
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +3
Query: 129 EVLLRMDCVGICGSDVHYWQK-GQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 305
E+ +++ IC SDV WQ Q F P I GHEASGVV +G V VGD V
Sbjct: 652 EIRVKVVSTSICRSDVTQWQSTAQTDLF----PRIFGHEASGVVESVGEGVTEFEVGDHV 707
Query: 306 AIEPGVPCRYCEFCKTGRYHLC 371
C C+ C +G+ ++C
Sbjct: 708 LTVFIGECMSCKHCVSGKSNMC 729
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 54.4 bits (125), Expect = 7e-08
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +3
Query: 129 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRVA 308
EV L++ IC +D+ W KG+ + P I+GHEA+GVV +G V++L GD V
Sbjct: 53 EVRLKVLFTSICHTDLSAW-KGE-NELQRKFPRILGHEAAGVVESVGEGVEDLAPGDHVV 110
Query: 309 IEPGVPCRYCEFCKTGRYHLC 371
C C +C++ + +LC
Sbjct: 111 PIFTGECGACTYCESSKSNLC 131
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +3
Query: 123 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 302
+D+V +++ GIC +D+H K G+ + P++ GHE GVV +G+ V GD
Sbjct: 32 DDDVTIKVLYCGICHTDLHI-VKNDWGNAMY--PVVPGHEIVGVVTGVGAGVTKFKAGDT 88
Query: 303 VAIEPGV-PCRYCEFCKTGRYHLCPDMI 383
V + V CR CE C G + C M+
Sbjct: 89 VGVGYFVASCRGCECCGNGYENYCAKMV 116
>04_03_0562 +
17190443-17190520,17190715-17190853,17190943-17191034,
17191681-17191989,17192817-17193506
Length = 435
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +3
Query: 87 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 266
L+ V+ P+P + +DEVL++++ I SD+ QKG F + P I + SG + ++
Sbjct: 25 LKFVEIPVPSVKKDEVLVKVEAASINQSDL-MTQKGMMRPFHPKFPFIPVNNVSGEIVEV 83
Query: 267 GSKVKNLTVGDRV 305
GS V+ VGD+V
Sbjct: 84 GSAVREFKVGDKV 96
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +3
Query: 105 PIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKN 284
P+ +++V++++ GIC SD+ K + G+ + P++ GHE GVVA++GS V
Sbjct: 26 PLRAKGDEDVVVKILFCGICHSDLSTI-KNEWGN--AKYPVVPGHEIVGVVAEVGSSVAR 82
Query: 285 LTVGDRVAI-EPGVPCRYCEFCKTGRYHLCPDMI 383
GD V + CR C C+ G + C ++
Sbjct: 83 FAAGDTVGVGYIASTCRACANCRDGFENYCAGLV 116
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +3
Query: 123 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 302
+D+V +++ GIC SD+H K + + V P++ GHE +GVV ++G V GD
Sbjct: 47 DDDVAIKVLYCGICHSDLHTI-KNEWRNAVY--PVVAGHEITGVVTEVGKNVARFKAGDE 103
Query: 303 VAIEPGV-PCRYCEFCKTGRYHLC 371
V + V C CE C+ G + C
Sbjct: 104 VGVGCMVNTCGGCESCRDGCENYC 127
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 50.0 bits (114), Expect = 1e-06
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 9/162 (5%)
Frame = +3
Query: 126 DEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 305
++V++++ GIC +D+H K G + PM+ GHE G V ++G +V + GD V
Sbjct: 35 EDVVVKVLYCGICHTDIHQ-AKNHLG--ASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVV 91
Query: 306 AIEPGVP-CRYCEFCKTGRYHLCPDMIFCATP------PVHGNLVRYYKHAADFCFKLPD 464
+ V CR C CK C I+ P G F K+P
Sbjct: 92 GVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTDGRPTQGGFASAMVVDQKFVVKIPA 151
Query: 465 HVTMEEGALLEPLAVGIHACKR--GGVSAGHVVLVLGAGPIG 584
+ E+ A L + +++ + G +S G VLG G +G
Sbjct: 152 GLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVLGLGGVG 193
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/90 (31%), Positives = 39/90 (43%)
Frame = +3
Query: 129 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRVA 308
E+ +++ C +C +DV W K P I+GHEA GVV +G V+ L GD V
Sbjct: 37 EIRIKIICTSLCHTDVTLWHKVDPAF-----PRILGHEAYGVVESVGENVEGLAAGDTVV 91
Query: 309 IEPGVPCRYCEFCKTGRYHLCPDMIFCATP 398
C C C + C + F P
Sbjct: 92 PTFMGQCDSCASCAAEWTNQCTAVPFTMGP 121
>11_06_0432 +
23448482-23448570,23448987-23449100,23449514-23449580,
23449614-23449741,23452786-23453071,23453264-23453414,
23453603-23453799
Length = 343
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/62 (35%), Positives = 36/62 (58%)
Frame = +3
Query: 114 EISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTV 293
E+ ++V LR+ G+C +DV W + + P++ GHE +GVV ++G+ VK V
Sbjct: 31 EVQSEDVSLRITHCGVCYADV-IWTRNMFNDSIY--PLVPGHEIAGVVTEVGADVKGFKV 87
Query: 294 GD 299
GD
Sbjct: 88 GD 89
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 46.8 bits (106), Expect = 1e-05
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +3
Query: 63 ALLYKPN-DLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGH 239
A+ ++P L L +P E+L++ G+C SD+H + G P ++GH
Sbjct: 53 AVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLK----GELPFSSPCVVGH 108
Query: 240 EASGVVAKIGSK-----VKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 371
E +G V G+ + VG V +PC C +C G+ LC
Sbjct: 109 EITGEVVDHGTHTPAEIINRFPVGSHVVGAFIMPCGNCFYCVKGQEDLC 157
>04_03_0559 +
17118319-17118396,17119329-17119467,17119569-17119660,
17119974-17120660
Length = 331
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +3
Query: 87 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 266
L+ V+ P+P + ++E+L++++ + +D QKG F + P I + SG V ++
Sbjct: 25 LKFVEIPVPSLKKNEILIKIEAASLNQADWRI-QKGLMRPFHPKFPFIPVTDVSGEVIEV 83
Query: 267 GSKVKNLTVGDRV 305
GS + VGD+V
Sbjct: 84 GSAIHEFKVGDKV 96
>04_03_0566 +
17209455-17209565,17210159-17210203,17211456-17211569,
17211943-17212081,17212324-17212415,17213245-17213517
Length = 257
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +3
Query: 87 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 266
L+ V+ P+P + + EVL++++ + D QKG F+ + P I + +G + +
Sbjct: 89 LKHVEIPVPSVKKHEVLIKVEAASVNPIDWSI-QKGMLRPFLPKFPFIPVTDVAGEIVEA 147
Query: 267 GSKVKNLTVGDRV 305
GS V L VGD+V
Sbjct: 148 GSAVHELKVGDKV 160
>08_02_0503 -
17848739-17849004,17849109-17849268,17849368-17849691,
17849787-17850209
Length = 390
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 108 IPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE---PMIMGHEASGVVAKIGSKV 278
+P+I++D+VL+R+ + D K + G F + P + G++ +GVV K G KV
Sbjct: 104 VPDIADDQVLVRVAAAALNPVDA----KRRAGKFKATDSPLPTVPGYDVAGVVVKAGRKV 159
Query: 279 KNLTVGDRV 305
K L GD V
Sbjct: 160 KGLKEGDEV 168
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +3
Query: 78 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 257
P LR Q + E E E+ ++ +G+ DV+Y Q G + P + G EA GVV
Sbjct: 58 PEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQ----GVYSAPLPFVPGREAVGVV 113
Query: 258 AKIGSKVKNLTVGDRVA 308
+G + VGD VA
Sbjct: 114 TAVGPGLTGRKVGDVVA 130
>09_04_0636 +
19150966-19151037,19151150-19151291,19151404-19151492,
19151589-19152308
Length = 340
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 87 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE-PMIMGHEASGVVAK 263
L+ V+ PIP + EVL++M+ I D + QKG F+ + P I ++ +G V +
Sbjct: 23 LKHVEVPIPTPKKGEVLIKMEAGSINQVDWKF-QKGVARPFMPNKFPFIPVYDLAGEVVE 81
Query: 264 IGSKVKNLTVGDRV 305
+G V + VGD+V
Sbjct: 82 LGRGVSSFKVGDKV 95
>04_03_0629 +
18179065-18179148,18180146-18180287,18180987-18181078,
18181272-18181964
Length = 336
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 87 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE-PMIMGHEASGVVAK 263
L+ V+ P+P ++EVLL+++ I D QKG + P I + +GVVA
Sbjct: 27 LKHVEVPVPSAKKNEVLLKLEAATINPVDWKI-QKGMLRPLLPRRLPFIPVTDVAGVVAG 85
Query: 264 IGSKVKNLTVGDRV 305
+G V + VGD+V
Sbjct: 86 VGPGVNDFAVGDQV 99
>01_06_0737 +
31592562-31592786,31593314-31593541,31593981-31594054,
31594595-31594754,31595979-31596098,31596185-31596293,
31597447-31597628
Length = 365
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +3
Query: 105 PIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE--PMIMGHEASGVVAKIGSKV 278
P+P++ +VL+R V I D+ + G + E P+I+G + SG VA G+ V
Sbjct: 51 PVPDLKPGDVLVRARAVSINPLDLR--MRSGYGRSIFEPVLPLIIGRDISGEVAATGTSV 108
Query: 279 KNLTVGDRV 305
+ T+G V
Sbjct: 109 SSFTIGQEV 117
>09_04_0641 +
19172370-19172459,19172539-19172680,19172951-19173039,
19173096-19173806
Length = 343
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 87 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFV-LEEPMIMGHEASGVVAK 263
L+ V+ PIP + EVL++M+ I D QKG F+ + P I + +G VA
Sbjct: 29 LKHVEVPIPSPKKGEVLIKMEAASINPIDWKI-QKGMLRPFLPWKFPSIPACDLAGKVAA 87
Query: 264 IGSKVKNLTVGDRV 305
+G V+ +GD+V
Sbjct: 88 VGGGVRRFELGDKV 101
>06_03_1023 -
26952195-26952635,26952723-26952934,26953038-26953757,
26955042-26955735
Length = 688
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 140 AHGLRGYLRVRRPLLAEGSMRTLRAGRTNDHGTRSFRSSGQDRFESQE 283
AHG G ++P + ++ R GR +DHG F G++RFE ++
Sbjct: 334 AHGGGGGGGEQQPHVTVSAVPAKRGGRRDDHGRLVFIQEGRERFELED 381
>03_01_0635 -
4660692-4660737,4660783-4660829,4661371-4661507,
4661661-4661697
Length = 88
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 129 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASG 251
EV +++ C +C SDV +W+ F P I GHEA G
Sbjct: 37 EVRIKIVCTSLCHSDVTFWRMQD---FPGVFPRIFGHEAFG 74
>03_05_0059 -
20359480-20359552,20359690-20359777,20360255-20360326,
20361765-20361963
Length = 143
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 441 DFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAGHVVLVLG 569
DFCF +P + G +L G A GG AG ++L+ G
Sbjct: 3 DFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLAG 45
>12_01_0816 + 7502669-7503145
Length = 158
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 529 GAESRRDTWCWYWER 573
G+E RRDTW W+ +R
Sbjct: 47 GSERRRDTWLWWRQR 61
>12_02_0067 +
13144002-13144203,13144471-13144529,13144638-13144713,
13144802-13144873,13144969-13145056,13145365-13145601,
13145705-13145910,13145946-13146122,13146220-13146251,
13146330-13146432,13146547-13146815,13148029-13148175,
13148272-13148412,13148509-13148595,13148841-13148931,
13149093-13149192,13149292-13149352,13149442-13149663,
13149756-13149872,13149972-13150061,13150168-13150344
Length = 917
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 402 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIH 518
+H +VR + ADFCFK H + EP + H
Sbjct: 161 LHPRIVRDFVRFADFCFKTYGHKVKNWFTINEPRMMANH 199
>06_01_0900 + 6926600-6927202
Length = 200
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/47 (25%), Positives = 17/47 (36%)
Frame = +1
Query: 130 RSCCAWTAWVSAGQTSTTGRRVNADTSCWKNQ*SWDTKLQE*WPRSV 270
R CC W W S+ + G A+ W + + W R V
Sbjct: 24 RCCCFWGPWASSSYSRAGGPAAAAEEEWWHRVGGGGGERRRWWRRGV 70
>03_06_0485 + 34242121-34243188
Length = 355
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 234 GHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCE-----FCKTGRYHLCPDMIFCAT 395
G G + GS + + EPG+ C CE FC Y L FC T
Sbjct: 30 GGPTGGTAVRPGSMTERARLAKIPQPEPGLKCPRCESTNTKFCYFNNYSLSQPRHFCKT 88
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,509,533
Number of Sequences: 37544
Number of extensions: 416608
Number of successful extensions: 1422
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1391
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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