Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5f01
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    26   0.81 
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    26   0.81 
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    26   0.81 
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   1.9  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    25   2.5  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    25   2.5  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   3.3  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   3.3  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   3.3  
AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding pr...    24   4.3  
AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative odorant-b...    24   4.3  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.7  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   5.7  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 26.2 bits (55), Expect = 0.81
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +3

Query: 54   NLTALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVL 215
            N+  L+ +P  L+ +     +  EDE++  +DC+ +C   V Y  +   G+ +L
Sbjct: 2348 NIAELVKEPKPLKAIDFCYHD--EDEMVTVLDCITLCVMVVSYSAESTRGYQML 2399


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 26.2 bits (55), Expect = 0.81
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 49  QIT*PLCCTNQMICVWYKHRSLKYLK 126
           +I   LC T + I +W+++R +K+ K
Sbjct: 276 EIAHALCLTERQIKIWFQNRRMKWKK 301


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 26.2 bits (55), Expect = 0.81
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +1

Query: 49  QIT*PLCCTNQMICVWYKHRSLKYLK 126
           +I   LC T + I +W+++R +K+ K
Sbjct: 312 EIAHALCLTERQIKIWFQNRRMKWKK 337


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 49  QIT*PLCCTNQMICVWYKHRSLKYLK 126
           +I   LC T + I +W+++R +K  K
Sbjct: 170 EIAHALCLTERQIKIWFQNRRMKLKK 195


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 64  LCCTNQMICVWYKHRSLKYLK 126
           LC T + I +W+++R +K  K
Sbjct: 256 LCLTERQIKIWFQNRRMKLKK 276


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 64  LCCTNQMICVWYKHRSLKYLK 126
           LC T + I +W+++R +K  K
Sbjct: 273 LCLTERQIKIWFQNRRMKLKK 293


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 472  PWKKERYWSPSRWAF 516
            P  KERYWS +R+ F
Sbjct: 1040 PVSKERYWSRNRFHF 1054


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 593 GKEADGSRSQYQHHVSRRDSAPL 525
           G    G  S+Y+HH+SR  S+ L
Sbjct: 464 GPGGGGGGSRYEHHLSRHASSIL 486


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 593 GKEADGSRSQYQHHVSRRDSAPL 525
           G    G  S+Y+HH+SR  S+ L
Sbjct: 440 GPGGGGGGSRYEHHLSRHASSIL 462


>AY330173-1|AAQ16279.1|  202|Anopheles gambiae odorant-binding
           protein AgamOBP46 protein.
          Length = 202

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -3

Query: 331 RHGTPGSMATRSPTVRFLTFEPILATTPEASCPMIIGSSSTKC 203
           +  TP      +P   FL     + TT  + CP  + S+ST+C
Sbjct: 145 KKATPKGTQVCNPEASFLV--DCIHTTVFSDCPTNLRSTSTEC 185


>AJ618917-1|CAF01996.1|  199|Anopheles gambiae putative
           odorant-binding protein OBPjj1 protein.
          Length = 199

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -3

Query: 331 RHGTPGSMATRSPTVRFLTFEPILATTPEASCPMIIGSSSTKC 203
           +  TP      +P   FL     + TT  + CP  + S+ST+C
Sbjct: 142 KKATPKGTQVCNPEASFLV--DCIHTTVFSDCPTNLRSTSTEC 182


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 200 RTLRAGRTNDHGTRSFRSSGQDRFESQESDS 292
           R+ R  R    GT+    S  DR  +Q SDS
Sbjct: 513 RSPRLDRKRKTGTKKRNPSSNDRSPNQNSDS 543


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 343 NSQYRHGTPGSMATRSPTVRFLTFEP 266
           NS+   G+P S    SPT+R L   P
Sbjct: 265 NSKNLTGSPKSQNLSSPTIRSLHISP 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,699
Number of Sequences: 2352
Number of extensions: 13817
Number of successful extensions: 36
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)