Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5f01
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 271 3e-73
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 253 8e-68
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 104 6e-23
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 84 8e-17
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 52 4e-07
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 48 4e-06
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 48 4e-06
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 47 9e-06
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical ... 34 0.067
Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical... 27 7.7
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 271 bits (664), Expect = 3e-73
Identities = 116/186 (62%), Positives = 153/186 (82%)
Frame = +3
Query: 42 MATDNLTALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 221
M+ DNL+A+LY +DLRL Q PIP+ ++VL+++ VGICGSDVHYW G G FV++E
Sbjct: 1 MSQDNLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKE 60
Query: 222 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 401
PMI+GHE SG+V+++G++VK+L VGDR+A+EPG+PC+ CE CKTGRY+LCP+M F ATPP
Sbjct: 61 PMIVGHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPP 120
Query: 402 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAGHVVLVLGAGPI 581
VHG L R+ H ADFCFKLPD+++ E+GAL+EPL+V IHAC+RG V GH VLVLGAGPI
Sbjct: 121 VHGTLSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPI 180
Query: 582 GLLTML 599
G+L ++
Sbjct: 181 GVLNLI 186
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 253 bits (619), Expect = 8e-68
Identities = 113/186 (60%), Positives = 147/186 (79%)
Frame = +3
Query: 42 MATDNLTALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE 221
M+ DNL+A+LY NDLRL Q PI + +VL++++ VGICGSDVH+ G G FV++E
Sbjct: 1 MSQDNLSAVLYGINDLRLEQAPISKPGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKE 60
Query: 222 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLCPDMIFCATPP 401
PM++GHE+SGVV++IGS+VK VGDR+A+EPG+PC+ CE CK GRY+LCPDM F ATPP
Sbjct: 61 PMVLGHESSGVVSEIGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPP 120
Query: 402 VHGNLVRYYKHAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAGHVVLVLGAGPI 581
V+G L R+ H ADFCFKLPD+++ E+GALLEPL+V I AC+RG V G +LVLGAGPI
Sbjct: 121 VNGALSRFVVHDADFCFKLPDNLSFEDGALLEPLSVAIQACRRGTVQMGQKILVLGAGPI 180
Query: 582 GLLTML 599
G+L +L
Sbjct: 181 GVLNLL 186
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 104 bits (249), Expect = 6e-23
Identities = 64/165 (38%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Frame = +3
Query: 87 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 266
L + Q PIP+ +EDE+L++M+ GIC SDVH W G H+V + PMI GHE +G V +
Sbjct: 22 LEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWL-GDF-HYVSKCPMIGGHEGAGSVISV 79
Query: 267 GSKVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAAD 443
GSKVKN +GD+V I+ C CE+C+TG LCP ++ +G Y
Sbjct: 80 GSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCPH-VWNIGVQKYGTFQEYATIRDV 138
Query: 444 FCFKLPDHVTMEEGA-LLEPLAVGIHACKRGGVSAGHVVLVLGAG 575
K+P + M A +L A K V +G +V V GAG
Sbjct: 139 DAIKIPKSMNMAAAAPVLCGGVTAYKALKESEVKSGQIVAVTGAG 183
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 83.8 bits (198), Expect = 8e-17
Identities = 56/167 (33%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Frame = +3
Query: 87 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE--PMIMGHEASGVVA 260
L + Q +P+ E+E+L++++ GIC SD+H W+ G F P+I GHE +G V
Sbjct: 22 LEVRQVSVPQPQENELLVKIEYSGICHSDLHTWE----GDFEYASICPLIGGHEGAGTVV 77
Query: 261 KIGSKVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHA 437
IGSKVK +GDR I+ C CE+CKTG LC D I HG Y
Sbjct: 78 TIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLC-DHIQNYGIDRHGTFQEYLTIR 136
Query: 438 ADFCFKLPDHVTMEEGA-LLEPLAVGIHACKRGGVSAGHVVLVLGAG 575
K+ + + A +L + K V G +V++ GAG
Sbjct: 137 DIDAIKVSNDTNLAAAAPVLCGGVTAYKSLKATNVKPGQIVVLTGAG 183
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 74.5 bits (175), Expect = 5e-14
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 2/165 (1%)
Frame = +3
Query: 87 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 266
L + Q P+P ++DE+L++++ GIC SD+H W V P++ GHE +G V +I
Sbjct: 21 LEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVC--PLVGGHEGAGSVVQI 78
Query: 267 GSKVKNLTVGDRVAIE-PGVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAAD 443
G V +GD+ ++ C CEFCK G LC + G Y
Sbjct: 79 GKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHIQNYGFDR-SGTFQEYLTIRGV 137
Query: 444 FCFKLPDHVTMEEGALLEPLAVGIH-ACKRGGVSAGHVVLVLGAG 575
K+ + A + V ++ A K V+ G ++++ GAG
Sbjct: 138 DAAKINKDTNLAAAAPILCAGVTVYKALKESNVAPGQIIVLTGAG 182
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 51.6 bits (118), Expect = 4e-07
Identities = 28/98 (28%), Positives = 45/98 (45%)
Frame = +3
Query: 78 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 257
P + +Q P+ E V ++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHEVRVKFQILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 78
Query: 258 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 371
+G V GD V C+ CE+CK + +LC
Sbjct: 79 ESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLC 116
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 48.4 bits (110), Expect = 4e-06
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +3
Query: 78 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 257
P + +Q P+ E V +++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHE--VRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76
Query: 258 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 371
+G V GD V C+ CE+CK + +LC
Sbjct: 77 ESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLC 114
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 48.4 bits (110), Expect = 4e-06
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +3
Query: 78 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 257
P + +Q P+ E V +++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHE--VRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76
Query: 258 AKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 371
+G V GD V C+ CE+CK + +LC
Sbjct: 77 ESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLC 114
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 47.2 bits (107), Expect = 9e-06
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +3
Query: 222 PMIMGHEASGVVAKIGSKVKNLTVGDRVAIEPGVPCRYCEFCKTGRYHLC 371
P+++GHE SG+V +G V GD V C+ CE+CK + ++C
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNMC 287
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 78 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 257
P+ + V++ +P + +++VL+R G+ D Y + GQ G P + G + +G V
Sbjct: 21 PDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDT-YIRAGQYGKLP-NLPYVPGKDGAGFV 78
Query: 258 AKIGSKVKNLTVGDRV 305
+G VKN+ VGDRV
Sbjct: 79 ELVGESVKNVKVGDRV 94
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 450 FKLPDHVTMEEGALL-EPLAVGIHAC-KRGGVSAGHVVLVLGA-GPIGLLTM 596
F+LP+ V+ EEGA L P A G G V+LV GA G +G M
Sbjct: 113 FELPEGVSFEEGASLGVPYLTAYRALFHLAGAKTGDVILVHGASGGVGSALM 164
>AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical
protein F56H1.6 protein.
Length = 381
Score = 34.3 bits (75), Expect = 0.067
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 15/104 (14%)
Frame = +3
Query: 87 LRLVQTPIPEISED-EVLLRMDCVGICGSDVHY-----------WQKGQ-CGHFVLEEPM 227
+ L + P+P I++ +VLL++ + DV W+K + C P+
Sbjct: 29 VELKEVPLPVINKPGQVLLKVKAASVNPIDVDMSQGYGREFLGTWKKIESCDAAASRFPL 88
Query: 228 IMGHEASGVVAKIGSKVKNLTVGDRV-AIEPGV-PCRYCEFCKT 353
I G + + VV +G V NL GD V A+ P + P + EF T
Sbjct: 89 IPGRDCTAVVESVGGDVHNLAPGDEVMAVVPVILPGTHAEFVVT 132
>Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical
protein W09H1.5 protein.
Length = 344
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 222 PMIMGHEASGVVAKIGSKVKNLTVGDRV 305
P + G+E G V +GS V ++ VGD V
Sbjct: 76 PAVGGNEGFGKVISVGSNVSSIKVGDHV 103
>Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical
protein F47G4.2 protein.
Length = 710
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = -2
Query: 314 LYGHSITNCQI-----LDFRTDLGHYS*SFVSHDHWFFQHEVSALTLLPVVDV*PADTHA 150
LY I+NC + + +L H S + ++ W+ E+ AL LL V+D+ TH
Sbjct: 164 LYSLDISNCGVTILTGISRLKNLRHLSLRSLIYESWYDIRELFALKLLNVLDLSMHSTH- 222
Query: 149 VHAQQDL 129
HA++++
Sbjct: 223 -HARRNM 228
>AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical
protein Y54G2A.45 protein.
Length = 354
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 336 CEFCKTGRYHLCPDMIFCATP 398
CE C YH C D C TP
Sbjct: 21 CETCLGSGYHYCADSKLCNTP 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,570,994
Number of Sequences: 27780
Number of extensions: 313913
Number of successful extensions: 1053
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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