Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5e21
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.2  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 465 FDYFIYLNMTYYI 427
           F YFIYL   YYI
Sbjct: 147 FCYFIYLFTVYYI 159


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -1

Query: 486 TTVKLQFFDYFIYLNMTYYI 427
           ++V ++ F Y+I  + TYY+
Sbjct: 137 SSVGVRMFQYYIGRSFTYYV 156


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 90  KNTKNKAKAILSNDAIGFFL 149
           KNT    +  L+ND + FF+
Sbjct: 213 KNTSTSKEIALNNDVLLFFV 232


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 474 LQFFDYFIYLNMTY 433
           L F+ YF YL+  Y
Sbjct: 82  LPFYSYFFYLSYIY 95


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 474 LQFFDYFIYLNMTY 433
           L F+ YF YL+  Y
Sbjct: 38  LPFYSYFFYLSYIY 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,772
Number of Sequences: 336
Number of extensions: 1538
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)