Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5e20
(368 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC021697-1|AAH21697.3| 124|Homo sapiens 15 kDa selenoprotein pr... 71 1e-12
BC016359-1|AAH16359.3| 165|Homo sapiens 15 kDa selenoprotein pr... 71 1e-12
BC005294-1|AAH05294.3| 165|Homo sapiens 15 kDa selenoprotein pr... 71 1e-12
AL121989-1|CAC04186.1| 162|Homo sapiens dJ604K5.1 (15 kDa selen... 71 1e-12
AF288992-1|AAG31557.1| 162|Homo sapiens 15 kDa selenoprotein pr... 71 1e-12
AF288991-1|AAG31556.1| 162|Homo sapiens 15 kDa selenoprotein pr... 71 1e-12
AF267982-1|AAF78966.1| 162|Homo sapiens 15 kDa selenoprotein pr... 71 1e-12
AF051894-1|AAC15478.1| 162|Homo sapiens 15 kDa selenoprotein pr... 71 1e-12
>BC021697-1|AAH21697.3| 124|Homo sapiens 15 kDa selenoprotein
protein.
Length = 124
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/80 (46%), Positives = 45/80 (56%)
Frame = +2
Query: 116 KCFVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECCHSD 295
+ + VL AEFS+E C LGF +NLLCSSCD L F+L QL C+ CC +
Sbjct: 19 RLLLATVLQAVSAFGAEFSSEACRELGF-SSNLLCSSCDLLGQFNLLQLDPDCRGCCQEE 77
Query: 296 ESASKEKKYARAILEVCTCK 355
+K YA AILEVC K
Sbjct: 78 AQFETKKLYAGAILEVCGUK 97
>BC016359-1|AAH16359.3| 165|Homo sapiens 15 kDa selenoprotein
protein.
Length = 165
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/80 (46%), Positives = 45/80 (56%)
Frame = +2
Query: 116 KCFVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECCHSD 295
+ + VL AEFS+E C LGF +NLLCSSCD L F+L QL C+ CC +
Sbjct: 19 RLLLATVLQAVSAFGAEFSSEACRELGF-SSNLLCSSCDLLGQFNLLQLDPDCRGCCQEE 77
Query: 296 ESASKEKKYARAILEVCTCK 355
+K YA AILEVC K
Sbjct: 78 AQFETKKLYAGAILEVCGUK 97
>BC005294-1|AAH05294.3| 165|Homo sapiens 15 kDa selenoprotein
protein.
Length = 165
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/80 (46%), Positives = 45/80 (56%)
Frame = +2
Query: 116 KCFVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECCHSD 295
+ + VL AEFS+E C LGF +NLLCSSCD L F+L QL C+ CC +
Sbjct: 19 RLLLATVLQAVSAFGAEFSSEACRELGF-SSNLLCSSCDLLGQFNLLQLDPDCRGCCQEE 77
Query: 296 ESASKEKKYARAILEVCTCK 355
+K YA AILEVC K
Sbjct: 78 AQFETKKLYAGAILEVCGUK 97
>AL121989-1|CAC04186.1| 162|Homo sapiens dJ604K5.1 (15 kDa
selenoprotein) protein.
Length = 162
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/80 (46%), Positives = 45/80 (56%)
Frame = +2
Query: 116 KCFVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECCHSD 295
+ + VL AEFS+E C LGF +NLLCSSCD L F+L QL C+ CC +
Sbjct: 16 RLLLATVLQAVSAFGAEFSSEACRELGF-SSNLLCSSCDLLGQFNLLQLDPDCRGCCQEE 74
Query: 296 ESASKEKKYARAILEVCTCK 355
+K YA AILEVC K
Sbjct: 75 AQFETKKLYAGAILEVCGXK 94
>AF288992-1|AAG31557.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/80 (46%), Positives = 45/80 (56%)
Frame = +2
Query: 116 KCFVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECCHSD 295
+ + VL AEFS+E C LGF +NLLCSSCD L F+L QL C+ CC +
Sbjct: 16 RLLLATVLQAVSAFGAEFSSEACRELGF-SSNLLCSSCDLLGQFNLLQLDPDCRGCCQEE 74
Query: 296 ESASKEKKYARAILEVCTCK 355
+K YA AILEVC K
Sbjct: 75 AQFETKKLYAGAILEVCGUK 94
>AF288991-1|AAG31556.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/80 (46%), Positives = 45/80 (56%)
Frame = +2
Query: 116 KCFVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECCHSD 295
+ + VL AEFS+E C LGF +NLLCSSCD L F+L QL C+ CC +
Sbjct: 16 RLLLATVLQAVSAFGAEFSSEACRELGF-SSNLLCSSCDLLGQFNLLQLDPDCRGCCQEE 74
Query: 296 ESASKEKKYARAILEVCTCK 355
+K YA AILEVC K
Sbjct: 75 AQFETKKLYAGAILEVCGUK 94
>AF267982-1|AAF78966.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/80 (46%), Positives = 45/80 (56%)
Frame = +2
Query: 116 KCFVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECCHSD 295
+ + VL AEFS+E C LGF +NLLCSSCD L F+L QL C+ CC +
Sbjct: 16 RLLLATVLQAVSAFGAEFSSEACRELGF-SSNLLCSSCDLLGQFNLLQLDPDCRGCCQEE 74
Query: 296 ESASKEKKYARAILEVCTCK 355
+K YA AILEVC K
Sbjct: 75 AQFETKKLYAGAILEVCGUK 94
>AF051894-1|AAC15478.1| 162|Homo sapiens 15 kDa selenoprotein
protein.
Length = 162
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/80 (46%), Positives = 45/80 (56%)
Frame = +2
Query: 116 KCFVLAVLVTYDGAVAEFSTEDCASLGFIKANLLCSSCDQLKDFSLEQLVDHCKECCHSD 295
+ + VL AEFS+E C LGF +NLLCSSCD L F+L QL C+ CC +
Sbjct: 16 RLLLATVLQAVSAFGAEFSSEACRELGF-SSNLLCSSCDLLGQFNLLQLDPDCRGCCQEE 74
Query: 296 ESASKEKKYARAILEVCTCK 355
+K YA AILEVC K
Sbjct: 75 AQFETKKLYAGAILEVCGUK 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,646,797
Number of Sequences: 237096
Number of extensions: 607380
Number of successful extensions: 1524
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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