Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5e18
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 29 1.8
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 29 1.8
AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical ... 28 4.2
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 28 5.6
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 28 5.6
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 28 5.6
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 28 5.6
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 28 5.6
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 28 5.6
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 28 5.6
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 27 7.4
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 27 7.4
Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical p... 27 9.7
Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical p... 27 9.7
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 286 SKKLNPEARTALYNGQLGFTLNLFNTINDAXPDDNIFFSPFSVYHSLLLAYLSSGGQTEE 465
S + E L + + F L+L N ++ FSP S+ +L L ++++ G+T +
Sbjct: 2 SDSSSDEKMGLLLHSETDFGLSLLRQQNLT---ESFVFSPLSIALALSLVHVAAKGETRD 58
Query: 466 ALRKSL 483
+RK+L
Sbjct: 59 EIRKAL 64
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 286 SKKLNPEARTALYNGQLGFTLNLFNTINDAXPDDNIFFSPFSVYHSLLLAYLSSGGQTEE 465
S + E L + + F L+L N ++ FSP S+ +L L ++++ G+T +
Sbjct: 2 SDSSSDEKMGLLLHSETDFGLSLLRQQNLT---ESFVFSPLSIALALSLVHVAAKGETRD 58
Query: 466 ALRKSL 483
+RK+L
Sbjct: 59 EIRKAL 64
>AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical
protein Y40B1A.2 protein.
Length = 120
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 559 CLYRELVCLLYTQSLNLFYPIHPRFLKISSELLQFVRRMR 440
C +R+ + + S + +Y RFL +S LLQF+R +R
Sbjct: 79 CFWRQ-IGIFSLSSSSKYYLCASRFLPLSHSLLQFLREIR 117
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 556 LYRELVCLLYTQSLNLFYPIHPRF 485
+++EL C LY + LF+P H +F
Sbjct: 201 VWKELYCNLYDYRIPLFHPSHAKF 224
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 385 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 483
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 385 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 483
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 385 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 483
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 385 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 483
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 385 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 483
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/33 (30%), Positives = 24/33 (72%)
Frame = +1
Query: 385 DNIFFSPFSVYHSLLLAYLSSGGQTEEALRKSL 483
+++ FSP S+ +L L ++++ G+T + +R++L
Sbjct: 23 ESLAFSPLSIALALSLVHVAAKGETRDQIREAL 55
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.5 bits (58), Expect = 7.4
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 VVSTVTSQCFYKDDSSKKLNPEARTALYNGQLGFTLNLFNTINDAXPDDNIFFSPFSVY- 417
V+S YK S N + N QL LN ND PD + F F +
Sbjct: 336 VLSISDDPVLYKHHSLFPKNQSSELEKINVQLRIRLNSKRQNNDVIPDSSYFVREFLMQK 395
Query: 418 HSLLLAYLSSGGQTEEALRKSLE 486
HS+ L S E + +LE
Sbjct: 396 HSISLRMNRSSDLPELFVPPTLE 418
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.5 bits (58), Expect = 7.4
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 VVSTVTSQCFYKDDSSKKLNPEARTALYNGQLGFTLNLFNTINDAXPDDNIFFSPFSVY- 417
V+S YK S N + N QL LN ND PD + F F +
Sbjct: 336 VLSISDDPVLYKHHSLFPKNQSSELEKINVQLRIRLNSKRQNNDVIPDSSYFVREFLMQK 395
Query: 418 HSLLLAYLSSGGQTEEALRKSLE 486
HS+ L S E + +LE
Sbjct: 396 HSISLRMNRSSDLPELFVPPTLE 418
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 27.5 bits (58), Expect = 7.4
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Frame = +1
Query: 241 VVSTVTSQCFYKDDSSKKLNPEARTALYNGQLGFTLNLFNTINDAXPDDNIFFSPFSVY- 417
V+S YK S N + N QL LN ND PD + F F +
Sbjct: 336 VLSISDDPVLYKHHSLFPKNQSSELEKINVQLRIRLNSKRQNNDVIPDSSYFVREFLMQK 395
Query: 418 HSLLLAYLSSGGQTEEALRKSLE 486
HS+ L S E + +LE
Sbjct: 396 HSISLRMNRSSDLPELFVPPTLE 418
>Z49909-15|CAF31470.1| 697|Caenorhabditis elegans Hypothetical
protein C14A4.12b protein.
Length = 697
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 539 LSTLYAVIKFILSNPSSISKDFLRASSVCPPDERYASSNEWYTEKG-EKNMLSSGXASL 366
+ T VI I S+ + +L +++ PPD S+ E +KG EK +LS G L
Sbjct: 483 IETSLNVISLIGSSVLVVFLAYLAKTALPPPDTSEDSTEEIIAKKGYEKQVLSLGVVML 541
>Z49909-14|CAA90116.2| 717|Caenorhabditis elegans Hypothetical
protein C14A4.12a protein.
Length = 717
Score = 27.1 bits (57), Expect = 9.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 539 LSTLYAVIKFILSNPSSISKDFLRASSVCPPDERYASSNEWYTEKG-EKNMLSSGXASL 366
+ T VI I S+ + +L +++ PPD S+ E +KG EK +LS G L
Sbjct: 503 IETSLNVISLIGSSVLVVFLAYLAKTALPPPDTSEDSTEEIIAKKGYEKQVLSLGVVML 561
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,303,103
Number of Sequences: 27780
Number of extensions: 243044
Number of successful extensions: 661
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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