Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5e13
(387 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 34 0.034
03_06_0471 + 34169562-34169892,34170121-34170347 33 0.10
02_04_0382 - 22501041-22501279,22501717-22501810 32 0.18
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 0.74
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 0.97
04_03_0142 + 11773124-11774158 28 3.0
01_01_0082 + 625198-625719 28 3.0
08_02_1289 - 25923916-25924586,25925148-25926630 27 3.9
04_03_0904 + 20717005-20718087 27 3.9
03_05_0937 - 28967038-28967245,28967348-28967556,28967584-289676... 27 3.9
09_02_0417 - 8915604-8916779,8916863-8917270 27 5.2
10_08_0493 + 18299885-18299892,18300201-18300837,18301254-183016... 27 6.9
08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,406... 27 6.9
02_03_0163 + 15859293-15860333 27 6.9
01_06_0389 - 28932228-28932365,28932967-28934184 27 6.9
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474... 26 9.1
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 26 9.1
01_06_0390 - 28938485-28938751,28939924-28941282 26 9.1
01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077 26 9.1
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 26 9.1
01_01_0047 + 334809-334877,334966-335074,335159-335299,336337-33... 26 9.1
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 34.3 bits (75), Expect = 0.034
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 103 YEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDPPQGRPYFKPTPFPGARG 261
Y P + P V PP Y P +G P N + Y +PP GRP P P GA G
Sbjct: 394 YAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGAGG 448
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 32.7 bits (71), Expect = 0.10
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 103 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 252
Y P P PP Y P+ GY P GAY PP G +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAY---PPSGYPQQPGYPPAGYPG 102
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 31.9 bits (69), Expect = 0.18
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +1
Query: 31 KFILCVLQIFVLALLAMAN-AQGNGYEPIDNRPYIVNPPK----DYNPNGNGYEPIDNGA 195
K +L + A +A A +G P ++ + PP D P+ + Y+P +
Sbjct: 11 KALLVFALLLAAAFVASAEQTHDDGDNPPESPDHEDPPPSPEYYDPPPSPDYYDPPHSPD 70
Query: 196 YYVDPPQGRPYFKPTPFPGARGG 264
YY DPP Y+ P P P GG
Sbjct: 71 YY-DPPPSPDYYDPPPSPYYGGG 92
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 29.9 bits (64), Expect = 0.74
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +1
Query: 121 RPYIVNP---PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 237
+PY P P P G Y P G Y PP+G+P + P
Sbjct: 266 QPYPPKPQGQPYPPQPQGQPYPPQPYGQTYPPPPKGQPTYPP 307
Score = 29.5 bits (63), Expect = 0.97
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +1
Query: 91 QGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF 246
QG Y+P R PP+ P Y P G Y PQG+PY P P+
Sbjct: 246 QGETYQPQPQRE--TYPPQ---PQVQPYPPKPQGQPYPPQPQGQPY-PPQPY 291
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 0.97
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 109 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 249
P + P IV P Y P+ YEP Y +PP PY P FP
Sbjct: 636 PYPSPPDIVPSPPSYEPSPPSYEP-SPPEYAPEPPVYAPY-PPGIFP 680
>04_03_0142 + 11773124-11774158
Length = 344
Score = 27.9 bits (59), Expect = 3.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 37 ILCVLQIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDY 153
I C L + + + A +A G EP +RPY+ + +D+
Sbjct: 158 IYCFLDLLLPCIAAAGSALGMELEPPFDRPYLASSLRDF 196
>01_01_0082 + 625198-625719
Length = 173
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 94 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF-PGARGG 264
G GY P + NP YNP +G+ N Y+ PP G Y + F P A G
Sbjct: 100 GGGYNPTPS----YNPTPGYNPTPSGWFTPPNMPSYLTPP-GTLYPQDPGFRPNAAAG 152
>08_02_1289 - 25923916-25924586,25925148-25926630
Length = 717
Score = 27.5 bits (58), Expect = 3.9
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = -1
Query: 375 ALQYVYLFIPLT*I---HMKF*NILLIHYFVINFLRYSLLPTASTRERGRLEV 226
ALQY+Y +P+ + H+K NILL F YSL+P + +L V
Sbjct: 519 ALQYLYDELPMLTVPHGHLKSSNILLNDRFEPLLTDYSLVPVMNQSHSAQLMV 571
>04_03_0904 + 20717005-20718087
Length = 360
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +1
Query: 136 NPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 249
NPP Y P Y+P PP +P KPTP P
Sbjct: 237 NPPPTYKPAPPTYKPQPKPN---PPPTYKPQPKPTPTP 271
>03_05_0937 -
28967038-28967245,28967348-28967556,28967584-28967644,
28967926-28968742,28968960-28971024
Length = 1119
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 189 RCILRGPSPR-PTLLQAYPFPWCSRW 263
+ I+ PSP P + A F WCS W
Sbjct: 755 KAIIHNPSPLIPPIFGADEFGWCSEW 780
>09_02_0417 - 8915604-8916779,8916863-8917270
Length = 527
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 124 PYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTP 243
PY +N P P+ Y P Y PPQ PY P P
Sbjct: 42 PYAMNFPFPPFPH---YPPYTQNLQYAVPPQYAPYTLPPP 78
>10_08_0493 +
18299885-18299892,18300201-18300837,18301254-18301676,
18301769-18302014,18302124-18302789,18303228-18303283,
18303367-18303460,18303559-18303738
Length = 769
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = +1
Query: 103 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 237
+ P D P + P +++ G G DPP GRP P
Sbjct: 474 FAPFDGPPVDILPNREFMLYGRSANSPPYGGPPNDPPYGRPAIDP 518
>08_01_0461 -
4063614-4064375,4064439-4066017,4066041-4066086,
4066416-4066933,4067435-4067694,4068089-4068594,
4068667-4071319
Length = 2107
Score = 26.6 bits (56), Expect = 6.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 162 WKRLRTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 281
W RLR R +L+ P+P P + + RW K +L
Sbjct: 836 WDRLRENSFRILLQFPTPLPGISSSTSIDSVIRWAKKLVL 875
>02_03_0163 + 15859293-15860333
Length = 346
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 34 FILCVLQIFVLALLAMANAQGNGYEPIDNRPYIVNPPKDY 153
F+ C L + + AL A A G EP +RPY+ +D+
Sbjct: 163 FMYCFLDVVLPALGAAGVALGMEMEPQFDRPYLSASLRDF 202
>01_06_0389 - 28932228-28932365,28932967-28934184
Length = 451
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 94 LERWP*PAERGRKSVKHII*TSFFD 20
L+RWP PA++ R S K + +F+D
Sbjct: 260 LDRWPEPAKQERASPKSTLHDAFWD 284
>09_04_0424 +
17444261-17444665,17445974-17446367,17447367-17447425,
17447507-17447637,17447737-17447833,17447936-17448100
Length = 416
Score = 26.2 bits (55), Expect = 9.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 136 NPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPGARG 261
NP + NG + +NG YY P Y P PFP G
Sbjct: 357 NPANKQLRSDNGSQ-WNNGMYYAASPFYSGYGYPAPFPADPG 397
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 26.2 bits (55), Expect = 9.1
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +1
Query: 88 AQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPG 252
+ NG P+ + PP P+ NGA PP G P P PG
Sbjct: 639 SMANGAGPVPPPIAVAPPPAPPIAGAAPPPPMANGAAAAAPPGGNPAPPAGPQPG 693
>01_06_0390 - 28938485-28938751,28939924-28941282
Length = 541
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 174 RTYRQRCILRGPSPRPTLLQAYPFPW 251
+ + RC R PS RPT Q P+
Sbjct: 234 KNFLSRCFTRNPSDRPTAAQLLEHPF 259
>01_05_0504 + 22781737-22781799,22782033-22782287,22783652-22784077
Length = 247
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = -1
Query: 300 YFVINFLRYSLLPTASTRERGRLEVRSALGRVHVICTVVDRFVAVSIRVVIFGRINDVRA 121
YF I F+ + + PT + + + + L V+C+ ++ V +R +I+G DV+A
Sbjct: 80 YFFIYFIGHGVFPTVHSLMKSKKDFPKVLLISSVLCS-LNYAVTTLLRYLIYG--EDVQA 136
Query: 120 VV 115
V
Sbjct: 137 QV 138
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 26.2 bits (55), Expect = 9.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 94 GNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPT-PFP 249
G+G +N+ Y N PK +P NG Y P G+P++ P P P
Sbjct: 113 GHGNPNKNNQAYHRNGPKRRSPAANGTPSYPAAMPYHQHP-GQPFYYPVIPSP 164
>01_01_0047 +
334809-334877,334966-335074,335159-335299,336337-336498,
336577-336734,337180-337310,337385-337472,337587-337690,
338346-338444,339060-339116,339262-339337,339519-339602,
339969-340010,340128-340198,341516-341564,342370-342441,
343149-343286,343393-343473,344166-344353,344591-345188,
345274-345342,346729-346854,347048-347175,347986-348142,
348342-348388,348472-348535,348691-348765,349292-349414,
349797-349982,351179-351303,351390-351459,351974-352101,
352585-352726,353065-353163,353239-353285,353598-353652,
353758-353967,354686-354757,354836-354905,355231-355414,
355521-355644,355732-355863,356252-356317,356805-356852,
357572-357676,357728-357865,358097-358399,358482-358594,
359082-359148,359236-359310,359395-359517,359610-359618,
360156-360320,360401-360502,361545-361696,361794-361995,
362079-362126,362215-362298,362613-362657,363302-363385,
363890-363970,364044-364133,364217-364279,364824-364841,
365238-365378,365494-365550,366091-366185,366275-366383,
367067-367156,367308-367387,367480-367558,367742-367903,
368005-368136,368335-368469,368553-368618,369317-369457,
369575-369648,369685-369910
Length = 2905
Score = 26.2 bits (55), Expect = 9.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 53 RFSSSLCWLWPTLKETATNLLTTAR 127
RF SL WL LKE + L+++AR
Sbjct: 363 RFQDSLLWLIRVLKEFSALLMSSAR 387
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,545,140
Number of Sequences: 37544
Number of extensions: 253093
Number of successful extensions: 680
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -