BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5e02
(628 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341150-1|AAR13714.1| 164|Anopheles gambiae aminopeptidase N p... 25 2.0
AY341149-1|AAR13713.1| 164|Anopheles gambiae aminopeptidase N p... 25 2.0
AY341148-1|AAR13712.1| 164|Anopheles gambiae aminopeptidase N p... 25 2.0
AY341147-1|AAR13711.1| 164|Anopheles gambiae aminopeptidase N p... 25 2.0
AY341146-1|AAR13710.1| 164|Anopheles gambiae aminopeptidase N p... 25 2.0
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 23 6.0
>AY341150-1|AAR13714.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.0 bits (52), Expect = 2.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 441 TTWIPSTYHTRQS 479
T WIP TYH QS
Sbjct: 74 TWWIPITYHVHQS 86
>AY341149-1|AAR13713.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.0 bits (52), Expect = 2.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 441 TTWIPSTYHTRQS 479
T WIP TYH QS
Sbjct: 74 TWWIPITYHVHQS 86
>AY341148-1|AAR13712.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.0 bits (52), Expect = 2.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 441 TTWIPSTYHTRQS 479
T WIP TYH QS
Sbjct: 74 TWWIPITYHVHQS 86
>AY341147-1|AAR13711.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.0 bits (52), Expect = 2.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 441 TTWIPSTYHTRQS 479
T WIP TYH QS
Sbjct: 74 TWWIPITYHVHQS 86
>AY341146-1|AAR13710.1| 164|Anopheles gambiae aminopeptidase N
protein.
Length = 164
Score = 25.0 bits (52), Expect = 2.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 441 TTWIPSTYHTRQS 479
T WIP TYH QS
Sbjct: 74 TWWIPITYHVHQS 86
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 23.4 bits (48), Expect = 6.0
Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = +3
Query: 351 IRIHGTSKHTYTPTACWSCPTW---TSRAIVLGTTWIPSTYHTRQSPLRPSL 497
I +H CW C W ++R + T TR +P P L
Sbjct: 5 ISVHVGQAGVQIGNPCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRL 56
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,313
Number of Sequences: 2352
Number of extensions: 11502
Number of successful extensions: 52
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -