Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5e01
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82243-1|CAI17926.1| 468|Homo sapiens nucleoporin 50kDa protein. 54 6e-07
CR456533-1|CAG30419.1| 468|Homo sapiens NUP50 protein. 54 6e-07
BC070133-1|AAH70133.1| 468|Homo sapiens nucleoporin 50kDa protein. 54 6e-07
AL389950-1|CAB97528.1| 178|Homo sapiens NPAP60L, nucleoporin pr... 54 6e-07
AL389949-1|CAB97527.1| 179|Homo sapiens NPAP60L, nucleoporin pr... 54 6e-07
AL008718-1|CAI17944.1| 468|Homo sapiens nucleoporin 50kDa protein. 54 6e-07
AF107840-1|AAD53401.1| 468|Homo sapiens nuclear pore-associated... 54 6e-07
D87930-1|BAA22378.1| 1030|Homo sapiens myosin phosphatase target... 32 1.5
BC111752-1|AAI11753.1| 1030|Homo sapiens PPP1R12A protein protein. 32 1.5
AY380574-1|AAQ88438.1| 974|Homo sapiens myosin phosphatase targ... 32 1.5
AF458589-1|AAM49717.1| 995|Homo sapiens myosin phosphatase targ... 32 1.5
BC146799-1|AAI46800.1| 923|Homo sapiens EML4 protein protein. 32 2.0
BC055084-1|AAH55084.1| 217|Homo sapiens NEXN protein protein. 30 6.0
S67069-1|AAB28815.1| 347|Homo sapiens autoantigen protein. 30 8.0
DQ464902-1|ABE97925.1| 675|Homo sapiens nexilin protein. 30 8.0
BC114445-1|AAI14446.1| 567|Homo sapiens NEXN protein protein. 30 8.0
BC114444-1|AAI14445.1| 567|Homo sapiens NEXN protein protein. 30 8.0
BC111395-1|AAI11396.1| 554|Homo sapiens NEXN protein protein. 30 8.0
BC017827-1|AAH17827.1| 320|Homo sapiens Unknown (protein for IM... 30 8.0
AF177377-1|AAG09279.2| 981|Homo sapiens cytoplasmic protein pro... 30 8.0
AF114264-1|AAD29607.1| 448|Homo sapiens unknown protein. 30 8.0
AC006038-1|AAY15086.1| 911|Homo sapiens unknown protein. 30 8.0
AB275889-1|BAF73612.1| 1310|Homo sapiens EML4-ALK variant 2 prot... 30 8.0
AB274722-1|BAF73611.1| 1059|Homo sapiens EML4-ALK variant 1 prot... 30 8.0
>Z82243-1|CAI17926.1| 468|Homo sapiens nucleoporin 50kDa protein.
Length = 468
Score = 53.6 bits (123), Expect = 6e-07
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +3
Query: 180 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGL 359
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR + T G
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRRNVGFESD---TGGA 57
Query: 360 FSGF 371
F GF
Sbjct: 58 FKGF 61
>CR456533-1|CAG30419.1| 468|Homo sapiens NUP50 protein.
Length = 468
Score = 53.6 bits (123), Expect = 6e-07
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +3
Query: 180 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGL 359
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR + T G
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRRNVGFESD---TGGA 57
Query: 360 FSGF 371
F GF
Sbjct: 58 FKGF 61
>BC070133-1|AAH70133.1| 468|Homo sapiens nucleoporin 50kDa protein.
Length = 468
Score = 53.6 bits (123), Expect = 6e-07
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +3
Query: 180 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGL 359
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR + T G
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRRNVGFESD---TGGA 57
Query: 360 FSGF 371
F GF
Sbjct: 58 FKGF 61
>AL389950-1|CAB97528.1| 178|Homo sapiens NPAP60L, nucleoporin
protein protein.
Length = 178
Score = 53.6 bits (123), Expect = 6e-07
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +3
Query: 180 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGL 359
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR + T G
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRRNVGFESD---TGGA 57
Query: 360 FSGF 371
F GF
Sbjct: 58 FKGF 61
>AL389949-1|CAB97527.1| 179|Homo sapiens NPAP60L, nucleoporin
protein protein.
Length = 179
Score = 53.6 bits (123), Expect = 6e-07
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +3
Query: 180 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGL 359
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR + T G
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRRNVGFESD---TGGA 57
Query: 360 FSGF 371
F GF
Sbjct: 58 FKGF 61
>AL008718-1|CAI17944.1| 468|Homo sapiens nucleoporin 50kDa protein.
Length = 468
Score = 53.6 bits (123), Expect = 6e-07
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +3
Query: 180 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGL 359
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR + T G
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRRNVGFESD---TGGA 57
Query: 360 FSGF 371
F GF
Sbjct: 58 FKGF 61
>AF107840-1|AAD53401.1| 468|Homo sapiens nuclear pore-associated
protein protein.
Length = 468
Score = 53.6 bits (123), Expect = 6e-07
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +3
Query: 180 KRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGL 359
KR A +L NWDQED E +E+GTF A +++L+ R IK AKRR + T G
Sbjct: 3 KRNAEKELTDRNWDQED--EAEEVGTFSMASEEVLKNRAIKKAKRRNVGFESD---TGGA 57
Query: 360 FSGF 371
F GF
Sbjct: 58 FKGF 61
>D87930-1|BAA22378.1| 1030|Homo sapiens myosin phosphatase target
subunit 1 protein.
Length = 1030
Score = 32.3 bits (70), Expect = 1.5
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRT-----TAPTDENKKTQGLFS 365
+ EN + + E ++ G K+ PK I E+R + +R T T +DEN++ Q +
Sbjct: 814 ITKENEREGEKREEEKEGEDKSQPKSIRERRRPREKRRSTGVSFWTQDSDENEQEQQSDT 873
Query: 366 GFGAFNKAPSSFDFLANLTKDSKSNATTTSAESGSAGLFS 485
G+ NK + D ++ S S + G +G +S
Sbjct: 874 EEGS-NKKETQTDSISRYETSSTSAGDRYDSLLGRSGSYS 912
>BC111752-1|AAI11753.1| 1030|Homo sapiens PPP1R12A protein protein.
Length = 1030
Score = 32.3 bits (70), Expect = 1.5
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRT-----TAPTDENKKTQGLFS 365
+ EN + + E ++ G K+ PK I E+R + +R T T +DEN++ Q +
Sbjct: 814 ITKENEREGEKREEEKEGEDKSQPKSIRERRRPREKRRSTGVSFWTQDSDENEQEQQSDT 873
Query: 366 GFGAFNKAPSSFDFLANLTKDSKSNATTTSAESGSAGLFS 485
G+ NK + D ++ S S + G +G +S
Sbjct: 874 EEGS-NKKETQTDSISRYETSSTSAGDRYDSLLGRSGSYS 912
>AY380574-1|AAQ88438.1| 974|Homo sapiens myosin phosphatase target
subunit 1 variant 2 protein.
Length = 974
Score = 32.3 bits (70), Expect = 1.5
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRT-----TAPTDENKKTQGLFS 365
+ EN + + E ++ G K+ PK I E+R + +R T T +DEN++ Q +
Sbjct: 758 ITKENEREGEKREEEKEGEDKSQPKSIRERRRPREKRRSTGVSFWTQDSDENEQEQQSDT 817
Query: 366 GFGAFNKAPSSFDFLANLTKDSKSNATTTSAESGSAGLFS 485
G+ NK + D ++ S S + G +G +S
Sbjct: 818 EEGS-NKKETQTDSISRYETSSTSAGDRYDSLLGRSGSYS 856
>AF458589-1|AAM49717.1| 995|Homo sapiens myosin phosphatase target
subunit 1 variant protein.
Length = 995
Score = 32.3 bits (70), Expect = 1.5
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRT-----TAPTDENKKTQGLFS 365
+ EN + + E ++ G K+ PK I E+R + +R T T +DEN++ Q +
Sbjct: 814 ITKENEREGEKREEEKEGEDKSQPKSIRERRRPREKRRSTGVSFWTQDSDENEQEQQSDT 873
Query: 366 GFGAFNKAPSSFDFLANLTKDSKSNATTTSAESGSAGLFS 485
G+ NK + D ++ S S + G +G +S
Sbjct: 874 EEGS-NKKETQTDSISRYETSSTSAGDRYDSLLGRSGSYS 912
>BC146799-1|AAI46800.1| 923|Homo sapiens EML4 protein protein.
Length = 923
Score = 31.9 bits (69), Expect = 2.0
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 156 LSPVIMSVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKR 314
LS S+KR + + +H +W+ D NK + + PK L +V KTA +
Sbjct: 107 LSSAAKSIKRPSPAEKSHNSWENSDDSRNK-LSKIPSTPK--LIPKVTKTADK 156
>BC055084-1|AAH55084.1| 217|Homo sapiens NEXN protein protein.
Length = 217
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/87 (21%), Positives = 38/87 (43%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGLFSGFGAF 380
L E +++ E K+ +A + EKR + A+R+ +EN+ T +F G+
Sbjct: 127 LTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGYRP- 185
Query: 381 NKAPSSFDFLANLTKDSKSNATTTSAE 461
K SF+ + ++ + A+
Sbjct: 186 GKLKLSFEEMERQRREDEKRKAEEEAK 212
>S67069-1|AAB28815.1| 347|Homo sapiens autoantigen protein.
Length = 347
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGLFSGF 371
L E +++ E K+ +A + EKR + A+R+ +EN+ T +F G+
Sbjct: 142 LTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGY 198
>DQ464902-1|ABE97925.1| 675|Homo sapiens nexilin protein.
Length = 675
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGLFSGF 371
L E +++ E K+ +A + EKR + A+R+ +EN+ T +F G+
Sbjct: 249 LTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGY 305
>BC114445-1|AAI14446.1| 567|Homo sapiens NEXN protein protein.
Length = 567
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGLFSGF 371
L E +++ E K+ +A + EKR + A+R+ +EN+ T +F G+
Sbjct: 141 LTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGY 197
>BC114444-1|AAI14445.1| 567|Homo sapiens NEXN protein protein.
Length = 567
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGLFSGF 371
L E +++ E K+ +A + EKR + A+R+ +EN+ T +F G+
Sbjct: 141 LTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGY 197
>BC111395-1|AAI11396.1| 554|Homo sapiens NEXN protein protein.
Length = 554
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGLFSGF 371
L E +++ E K+ +A + EKR + A+R+ +EN+ T +F G+
Sbjct: 127 LTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGY 183
>BC017827-1|AAH17827.1| 320|Homo sapiens Unknown (protein for
IMAGE:4338484) protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGLFSGF 371
L E +++ E K+ +A + EKR + A+R+ +EN+ T +F G+
Sbjct: 112 LTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGY 168
>AF177377-1|AAG09279.2| 981|Homo sapiens cytoplasmic protein
protein.
Length = 981
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 174 SVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKR 314
S+KR + + +H +W+ D NK + + PK L +V KTA +
Sbjct: 171 SIKRPSPAEKSHNSWENSDDSRNK-LSKIPSTPK--LIPKVTKTADK 214
>AF114264-1|AAD29607.1| 448|Homo sapiens unknown protein.
Length = 448
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 201 LNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKRRTTAPTDENKKTQGLFSGF 371
L E +++ E K+ +A + EKR + A+R+ +EN+ T +F G+
Sbjct: 21 LTFEELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGY 77
>AC006038-1|AAY15086.1| 911|Homo sapiens unknown protein.
Length = 911
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 174 SVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKR 314
S+KR + + +H +W+ D NK + + PK L +V KTA +
Sbjct: 101 SIKRPSPAEKSHNSWENSDDSRNK-LSKIPSTPK--LIPKVTKTADK 144
>AB275889-1|BAF73612.1| 1310|Homo sapiens EML4-ALK variant 2
protein.
Length = 1310
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 174 SVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKR 314
S+KR + + +H +W+ D NK + + PK L +V KTA +
Sbjct: 171 SIKRPSPAEKSHNSWENSDDSRNK-LSKIPSTPK--LIPKVTKTADK 214
>AB274722-1|BAF73611.1| 1059|Homo sapiens EML4-ALK variant 1
protein.
Length = 1059
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 174 SVKRQATTDLNHENWDQEDPEENKEMGTFKAAPKDILEKRVIKTAKR 314
S+KR + + +H +W+ D NK + + PK L +V KTA +
Sbjct: 171 SIKRPSPAEKSHNSWENSDDSRNK-LSKIPSTPK--LIPKVTKTADK 214
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,226,744
Number of Sequences: 237096
Number of extensions: 1381944
Number of successful extensions: 2842
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2835
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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