Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5d18
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      27   0.39 
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   4.8  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   8.4  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   8.4  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 27.5 bits (58), Expect = 0.39
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 151 DSLHLFLFILSVCLAFVDIIVLFYKLF 71
           +S+HLF   LSVCL    ++VL    F
Sbjct: 179 NSMHLFALTLSVCLCVGGLVVLLGAFF 205


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 189 PDKEEFLDVIYWMRQ 233
           PD EE LD I W +Q
Sbjct: 356 PDDEELLDYISWWQQ 370


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -3

Query: 307 TNNSSPRNPFNGNS---PQDSPKMIPIAWRIQYI 215
           T  S+P N     S   P D  K+ P AW+++ I
Sbjct: 291 TKKSTPPNAIPALSVRKPSDRAKLSPDAWQLEII 324


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 298 SSPRNPFNGNSPQDSPKMIPI 236
           SSP  P   +SPQ +P+  P+
Sbjct: 171 SSPGAPTGSSSPQITPRPTPV 191


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,901
Number of Sequences: 2352
Number of extensions: 13869
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)