Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5d18
         (651 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094757-1|AAM11110.1|  135|Drosophila melanogaster GM08654p pro...   119   3e-27
AY071508-1|AAL49130.1|  135|Drosophila melanogaster RE56128p pro...   119   3e-27
AE013599-479|AAF59208.1|  135|Drosophila melanogaster CG12107-PA...   119   3e-27
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ...    34   0.15 
BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro...    33   0.25 
AF273707-2|AAL35410.1| 1041|Drosophila melanogaster PFTAIRE-inte...    30   3.1  
AF145676-1|AAD38651.1|  869|Drosophila melanogaster BcDNA.GH1250...    30   3.1  
AE014297-815|AAN13400.1| 1041|Drosophila melanogaster CG33720-PB...    30   3.1  
AE014297-814|AAF54288.3| 1041|Drosophila melanogaster CG33720-PA...    30   3.1  
AY070530-1|AAL48001.1|  347|Drosophila melanogaster GM13767p pro...    29   7.2  
AE014134-53|AAF51536.1|  347|Drosophila melanogaster CG3436-PA, ...    29   7.2  

>AY094757-1|AAM11110.1|  135|Drosophila melanogaster GM08654p
           protein.
          Length = 135

 Score =  119 bits (287), Expect = 3e-27
 Identities = 55/115 (47%), Positives = 69/115 (60%)
 Frame = +3

Query: 132 KNKCNESIWKKALDKNSEWPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVI 311
           K+     I  +A+ K SEW DKEEFLDVIYW RQ                       F  
Sbjct: 16  KSSTLREICARAITK-SEWEDKEEFLDVIYWSRQVFGIFLGVIWGIVPLKGFLGLVLFAG 74

Query: 312 LNAAVIYVYVNNFHNIDEEEYGGMWEITKEGFMTSFAGFLVTWIIMYTGLHSEKL 476
           ++  ++Y+Y  NF N+DE+ YGG+WE+ KEGFMTSFAGFLVTWII YTGLH + +
Sbjct: 75  ISCGIVYLYAINFQNVDEDAYGGVWELIKEGFMTSFAGFLVTWIIFYTGLHYDAI 129


>AY071508-1|AAL49130.1|  135|Drosophila melanogaster RE56128p
           protein.
          Length = 135

 Score =  119 bits (287), Expect = 3e-27
 Identities = 55/115 (47%), Positives = 69/115 (60%)
 Frame = +3

Query: 132 KNKCNESIWKKALDKNSEWPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVI 311
           K+     I  +A+ K SEW DKEEFLDVIYW RQ                       F  
Sbjct: 16  KSSTLREICARAITK-SEWEDKEEFLDVIYWSRQVFGIFLGVIWGIVPLKGFLGLVLFAG 74

Query: 312 LNAAVIYVYVNNFHNIDEEEYGGMWEITKEGFMTSFAGFLVTWIIMYTGLHSEKL 476
           ++  ++Y+Y  NF N+DE+ YGG+WE+ KEGFMTSFAGFLVTWII YTGLH + +
Sbjct: 75  ISCGIVYLYAINFQNVDEDAYGGVWELIKEGFMTSFAGFLVTWIIFYTGLHYDAI 129


>AE013599-479|AAF59208.1|  135|Drosophila melanogaster CG12107-PA
           protein.
          Length = 135

 Score =  119 bits (287), Expect = 3e-27
 Identities = 55/115 (47%), Positives = 69/115 (60%)
 Frame = +3

Query: 132 KNKCNESIWKKALDKNSEWPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVI 311
           K+     I  +A+ K SEW DKEEFLDVIYW RQ                       F  
Sbjct: 16  KSSTLREICARAITK-SEWEDKEEFLDVIYWSRQVFGIFLGVIWGIVPLKGFLGLVLFAG 74

Query: 312 LNAAVIYVYVNNFHNIDEEEYGGMWEITKEGFMTSFAGFLVTWIIMYTGLHSEKL 476
           ++  ++Y+Y  NF N+DE+ YGG+WE+ KEGFMTSFAGFLVTWII YTGLH + +
Sbjct: 75  ISCGIVYLYAINFQNVDEDAYGGVWELIKEGFMTSFAGFLVTWIIFYTGLHYDAI 129


>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
           protein.
          Length = 1711

 Score = 34.3 bits (75), Expect = 0.15
 Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -3

Query: 148 SLHLFLFI-LSVCLAFVDIIVLFYKLFNYFYVKSEILQSYSRIF 20
           ++ +F++I + +C+ F+ I +L  KLFN  +VKS     Y+ I+
Sbjct: 765 NMRIFIYISIGICVVFIVIALLTLKLFNGVFVKSARTSIYTSIY 808


>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p protein.
          Length = 1870

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = -3

Query: 148  SLHLFLFI-LSVCLAFVDIIVLFYKLFNYFYVKSEILQSYSRIF 20
            ++ +F++I + +C+ F+ I ++  KLFN  +VKS     Y+ I+
Sbjct: 924  NMRIFIYISIGICVVFIVIALITLKLFNGVFVKSARTSIYTSIY 967


>AF273707-2|AAL35410.1| 1041|Drosophila melanogaster
           PFTAIRE-interacting factor 1B protein.
          Length = 1041

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -3

Query: 379 PPYSSSSMLWKLFTYTYITAAFKMTNNSSPRNPFNGNSPQD--SPKMIPIAWRIQYITSK 206
           PP+++    W  F Y     A K + + +PR P  G  P+   SP M  +  ++     K
Sbjct: 728 PPWTTQQTDWAAFPYNLDPCAQKESPSPAPRGPRTGLLPEGPLSPDMRNLCEQLLRKALK 787

Query: 205 NSSLSGHSEFLS 170
           +  L G  +  S
Sbjct: 788 DCGLCGGDDVYS 799


>AF145676-1|AAD38651.1|  869|Drosophila melanogaster BcDNA.GH12504
           protein.
          Length = 869

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -3

Query: 379 PPYSSSSMLWKLFTYTYITAAFKMTNNSSPRNPFNGNSPQD--SPKMIPIAWRIQYITSK 206
           PP+++    W  F Y     A K + + +PR P  G  P+   SP M  +  ++     K
Sbjct: 728 PPWTTQQTDWAAFPYNLDPCAQKESPSPAPRGPRTGLLPEGPLSPDMRNLCEQLLRKALK 787

Query: 205 NSSLSGHSEFLS 170
           +  L G  +  S
Sbjct: 788 DCGLCGGDDVYS 799


>AE014297-815|AAN13400.1| 1041|Drosophila melanogaster CG33720-PB,
           isoform B protein.
          Length = 1041

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -3

Query: 379 PPYSSSSMLWKLFTYTYITAAFKMTNNSSPRNPFNGNSPQD--SPKMIPIAWRIQYITSK 206
           PP+++    W  F Y     A K + + +PR P  G  P+   SP M  +  ++     K
Sbjct: 728 PPWTTQQTDWAAFPYNLDPCAQKESPSPAPRGPRTGLLPEGPLSPDMRNLCEQLLRKALK 787

Query: 205 NSSLSGHSEFLS 170
           +  L G  +  S
Sbjct: 788 DCGLCGGDDVYS 799


>AE014297-814|AAF54288.3| 1041|Drosophila melanogaster CG33720-PA,
           isoform A protein.
          Length = 1041

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
 Frame = -3

Query: 379 PPYSSSSMLWKLFTYTYITAAFKMTNNSSPRNPFNGNSPQD--SPKMIPIAWRIQYITSK 206
           PP+++    W  F Y     A K + + +PR P  G  P+   SP M  +  ++     K
Sbjct: 728 PPWTTQQTDWAAFPYNLDPCAQKESPSPAPRGPRTGLLPEGPLSPDMRNLCEQLLRKALK 787

Query: 205 NSSLSGHSEFLS 170
           +  L G  +  S
Sbjct: 788 DCGLCGGDDVYS 799


>AY070530-1|AAL48001.1|  347|Drosophila melanogaster GM13767p
           protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -3

Query: 232 WRIQYITSKNSSLSGHSEFLSRAFFHIDSLHLFLFILSVCLAFVDI 95
           W++        ++SGHS  +  A F  D  H+F       LAF DI
Sbjct: 82  WQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDI 127


>AE014134-53|AAF51536.1|  347|Drosophila melanogaster CG3436-PA,
           isoform A protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -3

Query: 232 WRIQYITSKNSSLSGHSEFLSRAFFHIDSLHLFLFILSVCLAFVDI 95
           W++        ++SGHS  +  A F  D  H+F       LAF DI
Sbjct: 82  WQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDI 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,056,610
Number of Sequences: 53049
Number of extensions: 580266
Number of successful extensions: 1278
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)