Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5d18
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016421-12|AAC25794.1| 121|Caenorhabditis elegans Hypothetical... 89 3e-18
U28991-3|AAK68309.1| 298|Caenorhabditis elegans Hypothetical pr... 32 0.41
U41013-4|AAA82303.2| 329|Caenorhabditis elegans Serpentine rece... 30 1.2
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 29 3.8
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 29 3.8
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 28 5.0
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 28 5.0
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 28 5.0
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 28 5.0
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 28 5.0
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 28 5.0
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 28 5.0
U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine rece... 28 5.0
AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion transpo... 28 5.0
AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion transpo... 28 5.0
AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate perme... 28 5.0
U64848-8|ABS83847.1| 408|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical... 28 6.6
AF024503-12|AAG24092.2| 329|Caenorhabditis elegans Serpentine r... 28 6.6
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 27 8.7
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AF016421-12|AAC25794.1| 121|Caenorhabditis elegans Hypothetical
protein F44E7.9 protein.
Length = 121
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/98 (39%), Positives = 53/98 (54%)
Frame = +3
Query: 162 KALDKNSEWPDKEEFLDVIYWMRQAXXXXXXXXXXXXXXXXXXXXXXFVILNAAVIYVYV 341
K L SEWPDK+E LDV+YW +Q +V ++ + + +V
Sbjct: 19 KGLTPRSEWPDKDELLDVVYWGKQVISLLLGFIFGITSLTGVLVLVCYVGTSSVIAHHFV 78
Query: 342 NNFHNIDEEEYGGMWEITKEGFMTSFAGFLVTWIIMYT 455
F +DEEE GG WE++KEGF +FA F+VTWI YT
Sbjct: 79 TKFQRVDEEEVGGFWELSKEGFGAAFATFMVTWITTYT 116
>U28991-3|AAK68309.1| 298|Caenorhabditis elegans Hypothetical
protein F08F8.6 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 163 FFHIDSLHLFLFILSVCLAFVDIIVLFYKLFNYFYVKSEI 44
+FH + L L L+I++ L F+ ++ Y +FN F + S I
Sbjct: 28 YFHYNKLALGLWIVASALCFIALLSTIYSVFNAFQLWSTI 67
>U41013-4|AAA82303.2| 329|Caenorhabditis elegans Serpentine
receptor, class t protein73 protein.
Length = 329
Score = 30.3 bits (65), Expect = 1.2
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = -3
Query: 553 IQNCFNFTLANTSDLLLQCIIVFL-SHNFSE---CNPVYIIIHVTKNPANEVIKP-SLVI 389
I N FN + T L++ CI+ FL + FS P Y + NP + V++ S I
Sbjct: 146 IFNSFNMKIYFTIVLIVWCIVCFLNAFGFSRMVYLLPAYTWHYAASNPLSAVLRSVSADI 205
Query: 388 SHIPPYSSSSMLWKLFTYTYITAA 317
S I S +F+Y Y AA
Sbjct: 206 SLIDVVFSLFAHLVIFSYIYFKAA 229
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical protein
K04B12.1 protein.
Length = 1764
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -3
Query: 316 FKMTNNSSPRNPFNGNSPQDS---PKMIPIAWRIQYITSKNSSLSGHSEFLSRAFFHIDS 146
+ +TN SS F S DS PK IP + + +TSK + + +FL + DS
Sbjct: 1508 YHLTNPSSGTMTFKKKSSNDSNLLPKSIPEVYLTRLLTSKGTVETYVEDFLESVLYMHDS 1567
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -3
Query: 316 FKMTNNSSPRNPFNGNSPQDS---PKMIPIAWRIQYITSKNSSLSGHSEFLSRAFFHIDS 146
+ +TN SS F S DS PK IP + + +TSK + + +FL + DS
Sbjct: 1510 YHLTNPSSGTMTFKKKSSNDSNLLPKSIPEVYLTRLLTSKGTVETYVEDFLESVLYMHDS 1569
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 388 SHIPPYSSSSMLWKLFTYTYITAAFKMT--NNSSPRNPFNGNSPQDSPKMIPIAWRIQYI 215
+H P S S L T TAA ++T N+S P N N ++P DS + A Y
Sbjct: 221 NHTPTGSFVSSSGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASPPDYR 280
Query: 214 TSKNSS 197
TS ++
Sbjct: 281 TSSGTA 286
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 388 SHIPPYSSSSMLWKLFTYTYITAAFKMT--NNSSPRNPFNGNSPQDSPKMIPIAWRIQYI 215
+H P S S L T TAA ++T N+S P N N ++P DS + A Y
Sbjct: 358 NHTPTGSFVSSSGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASPPDYR 417
Query: 214 TSKNSS 197
TS ++
Sbjct: 418 TSSGTA 423
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 388 SHIPPYSSSSMLWKLFTYTYITAAFKMT--NNSSPRNPFNGNSPQDSPKMIPIAWRIQYI 215
+H P S S L T TAA ++T N+S P N N ++P DS + A Y
Sbjct: 333 NHTPTGSFVSSSGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASPPDYR 392
Query: 214 TSKNSS 197
TS ++
Sbjct: 393 TSSGTA 398
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 388 SHIPPYSSSSMLWKLFTYTYITAAFKMT--NNSSPRNPFNGNSPQDSPKMIPIAWRIQYI 215
+H P S S L T TAA ++T N+S P N N ++P DS + A Y
Sbjct: 324 NHTPTGSFVSSSGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASPPDYR 383
Query: 214 TSKNSS 197
TS ++
Sbjct: 384 TSSGTA 389
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 388 SHIPPYSSSSMLWKLFTYTYITAAFKMT--NNSSPRNPFNGNSPQDSPKMIPIAWRIQYI 215
+H P S S L T TAA ++T N+S P N N ++P DS + A Y
Sbjct: 299 NHTPTGSFVSSSGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASPPDYR 358
Query: 214 TSKNSS 197
TS ++
Sbjct: 359 TSSGTA 364
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 388 SHIPPYSSSSMLWKLFTYTYITAAFKMT--NNSSPRNPFNGNSPQDSPKMIPIAWRIQYI 215
+H P S S L T TAA ++T N+S P N N ++P DS + A Y
Sbjct: 384 NHTPTGSFVSSSGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASPPDYR 443
Query: 214 TSKNSS 197
TS ++
Sbjct: 444 TSSGTA 449
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -3
Query: 388 SHIPPYSSSSMLWKLFTYTYITAAFKMT--NNSSPRNPFNGNSPQDSPKMIPIAWRIQYI 215
+H P S S L T TAA ++T N+S P N N ++P DS + A Y
Sbjct: 359 NHTPTGSFVSSSGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDSFFSVGSASPPDYR 418
Query: 214 TSKNSS 197
TS ++
Sbjct: 419 TSSGTA 424
>U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine
receptor, class r protein10 protein.
Length = 385
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 238 IAWRI-QYITSKNSSLSGHSEFLSRAFFHIDSLHLFLFILSVCLA-FVDIIVLFYKLFNY 65
++W I +I K G FLSR F + + +++ +I ++CLA ++ I + NY
Sbjct: 145 MSWIIYNFINGKIYYGGGEQNFLSRIFILVTNFYIW-YISTICLAIYIFISSALNREVNY 203
Query: 64 F 62
F
Sbjct: 204 F 204
>AY954523-1|AAX34431.1| 729|Caenorhabditis elegans anion
transporter SULP-1b protein.
Length = 729
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 214 TSKNSSLSGHSEFLSRAFFHIDSLHLFLFILSVCLAFVDIIVLFYKL-FNYFYVKSEILQ 38
++++SSL S + I+ H L +S+C AF+ ++ L F + Y+ + L
Sbjct: 126 SAQHSSLGALSFLSIMIYCSIEYSHSHLSSISLCCAFIQLMQFLLPLEFIFSYISTSALS 185
Query: 37 SYS 29
+S
Sbjct: 186 GFS 188
>AY887907-1|AAX34419.1| 729|Caenorhabditis elegans anion
transporter SULP-1a protein.
Length = 729
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 214 TSKNSSLSGHSEFLSRAFFHIDSLHLFLFILSVCLAFVDIIVLFYKL-FNYFYVKSEILQ 38
++++SSL S + I+ H L +S+C AF+ ++ L F + Y+ + L
Sbjct: 126 SAQHSSLGALSFLSIMIYCSIEYSHSHLSSISLCCAFIQLMQFLLPLEFIFSYISTSALS 185
Query: 37 SYS 29
+S
Sbjct: 186 GFS 188
>AC006625-1|AAK68277.2| 729|Caenorhabditis elegans Sulfate permease
family protein 1 protein.
Length = 729
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 214 TSKNSSLSGHSEFLSRAFFHIDSLHLFLFILSVCLAFVDIIVLFYKL-FNYFYVKSEILQ 38
++++SSL S + I+ H L +S+C AF+ ++ L F + Y+ + L
Sbjct: 126 SAQHSSLGALSFLSIMIYCSIEYSHSHLSSISLCCAFIQLMQFLLPLEFIFSYISTSALS 185
Query: 37 SYS 29
+S
Sbjct: 186 GFS 188
>U64848-8|ABS83847.1| 408|Caenorhabditis elegans Hypothetical
protein C50E3.16 protein.
Length = 408
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 4 LTSSNKKSDYSSVGFLILHKNN*TIYK 84
L S K SDY + F+ LH+N TIYK
Sbjct: 183 LVSEAKYSDYLKLFFVELHQNLYTIYK 209
>AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical
protein Y105C5A.17 protein.
Length = 337
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 538 NFTLANTSDLLLQCIIVFLSHNFSECNPVYIIIHVTKNPANE-VIKPSLVISHIPPYSSS 362
+F+ S LLL + V + F + ++ I + K ANE + +P + ISH YS
Sbjct: 232 SFSKTEFSSLLLTVLSVIYINVFRKLFQYFLHISILKQIANENMFRPIIAISH--AYSVQ 289
Query: 361 SML 353
+M+
Sbjct: 290 NMI 292
>AF024503-12|AAG24092.2| 329|Caenorhabditis elegans Serpentine
receptor, class u protein25 protein.
Length = 329
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 199 SLSGHSEFLSR--AFFHIDSLHLFLFILSVCLAFVDIIVLFYKLFNYFYVKSEILQ 38
S+ GH +F++ +FF I L IL + FV + +F KLF F K LQ
Sbjct: 11 SIHGHPDFINFEFSFFTIPMLLTITPILYIPATFVVVSRIFSKLFGEFRDKHVNLQ 66
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 388 SHIPPYSSSSMLWKLFTYTYITAAFKMT--NNSSPRNPFNGNSPQDS 254
+H P S S L T TAA ++T N+S P N N ++P DS
Sbjct: 358 NHTPTGSFVSSSGFLSEVTNNTAAMQITSPNDSRPNNFMNNSAPSDS 404
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 105 KAKQTDNINKNKCNESIWKKA 167
K+ +TD+INK+ ES+W A
Sbjct: 1307 KSTKTDDINKSVAGESVWSDA 1327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,042,337
Number of Sequences: 27780
Number of extensions: 324387
Number of successful extensions: 1013
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1012
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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