Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5d16
         (127 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   0.87 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   2.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   2.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    19   3.5  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 0.87
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 87  HRIDKFIKNLNA 52
           HR+ K IK LNA
Sbjct: 220 HRLSKLIKQLNA 231


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 10  RSRIGPFLFY 39
           R R+ P+LFY
Sbjct: 115 RDRVNPYLFY 124


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 37  YLELKCI*IFNK 72
           YLE+KC  I+N+
Sbjct: 783 YLEIKCKRIYNE 794


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 84   RIDKFIKNLNAF*FQIKQ 31
            +I KF+  + AF  Q+KQ
Sbjct: 1182 KIVKFLDGIMAFDIQLKQ 1199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,895
Number of Sequences: 336
Number of extensions: 189
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 22
effective length of database: 115,193
effective search space used:  2188667
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)