Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5d15
         (669 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75955-3|CAB00114.1|  461|Caenorhabditis elegans Hypothetical pr...   104   7e-23
Z75955-13|CAB00113.2|  424|Caenorhabditis elegans Hypothetical p...    56   2e-08
AF016676-2|AAG24106.1|  500|Caenorhabditis elegans Cytochrome p4...    29   3.9  
U41746-3|AAO25990.1|  429|Caenorhabditis elegans Aspartyl protea...    28   6.9  
U41746-2|AAO25989.1|  635|Caenorhabditis elegans Aspartyl protea...    28   6.9  
U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical pr...    28   6.9  

>Z75955-3|CAB00114.1|  461|Caenorhabditis elegans Hypothetical
           protein R07B7.5 protein.
          Length = 461

 Score =  104 bits (249), Expect = 7e-23
 Identities = 51/118 (43%), Positives = 78/118 (66%)
 Frame = +2

Query: 194 SLEALFLAKRGHRVRLYEYREDIRNTPQARGRSINLALSIRGRTALREVGLEDHMINNHG 373
           +L A F A++G  V +YE+R+DIR     +GRSINLALS RG++AL  VGL+++++ N G
Sbjct: 14  ALNACFFAQKGWDVSVYEFRKDIRTMKHVQGRSINLALSQRGKSALEAVGLKEYIV-NQG 72

Query: 374 IPMKGRNIHRIDGSTYIIPYDSRTKQCIYSVGRNYLNGLLLQESEKYENVERFFNHKL 547
           +P+  R IH  DG TY      +  + I S+ R +LN +++ ++EK  NV+ FF HK+
Sbjct: 73  VPLYARLIHNKDGKTYSRQPYGKPGEHIVSINRRHLNEVMITQAEKSPNVKFFFEHKV 130



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
 Frame = +3

Query: 597 PKEIVE--VNADLIIGADGAFSAVRK 668
           P+E  E  V ADLI+  DGA+SAVR+
Sbjct: 160 PQEHAEFHVEADLILACDGAYSAVRR 185


>Z75955-13|CAB00113.2|  424|Caenorhabditis elegans Hypothetical
           protein R07B7.4 protein.
          Length = 424

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 34/106 (32%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 284 GRSINLALSIRGRTALREVGLEDHMINNHGIPMKGRNIHRID--GSTYIIPYDSRTKQCI 457
           G+SINLAL +R  + ++ +GL++ +I + G+P++ +  H  D  G    +P        I
Sbjct: 4   GKSINLALGVRAMSTMKRIGLKEKVI-HIGVPIRDQIAHFGDTKGKLKRLPV-LNDDDFI 61

Query: 458 YSVGRNYLNGLLLQESEKYENVERFFNHKLIASNLRKGFLSFQKTD 595
            ++ R  L+ +L+ E+EKY NV+  FN K    +L+   L  Q +D
Sbjct: 62  LTINRQELSQILINEAEKYNNVKFHFNCKATKFDLKSESLIVQNSD 107


>AF016676-2|AAG24106.1|  500|Caenorhabditis elegans Cytochrome p450
           family protein 33C3 protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +2

Query: 458 YSVGRNYLNGLLLQESEKYENVERFFNHKLIASNLRKGFLSFQKTD 595
           +S+GR    G  L   E +  V  FFNH  I+ +  +GF S  K+D
Sbjct: 432 FSIGRRQCPGEGLARMEIFLFVANFFNHYQISPS-SEGFPSIDKSD 476


>U41746-3|AAO25990.1|  429|Caenorhabditis elegans Aspartyl protease
           protein 2, isoformb protein.
          Length = 429

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 386 GRNIHRIDGSTYIIPYDSRTKQCIYSV 466
           G  ++ ID S  IIP    +  CIY++
Sbjct: 361 GNQVYNIDSSNTIIPLGDGSNNCIYAI 387


>U41746-2|AAO25989.1|  635|Caenorhabditis elegans Aspartyl protease
           protein 2, isoforma protein.
          Length = 635

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 386 GRNIHRIDGSTYIIPYDSRTKQCIYSV 466
           G  ++ ID S  IIP    +  CIY++
Sbjct: 567 GNQVYNIDSSNTIIPLGDGSNNCIYAI 593


>U13642-4|AAG00043.2|  687|Caenorhabditis elegans Hypothetical
           protein ZC395.8 protein.
          Length = 687

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/71 (23%), Positives = 28/71 (39%)
 Frame = +2

Query: 431 YDSRTKQCIYSVGRNYLNGLLLQESEKYENVERFFNHKLIASNLRKGFLSFQKTDTXRNS 610
           YD R  +  YS  RNY N    Q +++  +    FN   ++ N         +  + R+ 
Sbjct: 603 YDERWSRNDYSNPRNYSNRSFHQRNQRGHSSSNRFNSPFVSRNNYNNNSETTEGSSRRSE 662

Query: 611 *SQCRPNHRGR 643
            +    NH  R
Sbjct: 663 YNSSSSNHHSR 673


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,612,154
Number of Sequences: 27780
Number of extensions: 309022
Number of successful extensions: 683
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)