Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5d12
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787 103 1e-22
12_01_0760 + 6910325-6910558,6911305-6911455,6911949-6912115,691... 93 1e-19
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 91 9e-19
12_01_0756 + 6869100-6869327,6869943-6870123,6870233-6870399,687... 88 6e-18
12_01_0762 + 6915299-6915532,6916043-6916220,6916490-6916656,691... 86 2e-17
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 74 8e-14
12_01_0764 + 6934570-6934726,6935150-6935316,6935408-6935490,693... 71 1e-12
01_06_1628 + 38745964-38746480,38747116-38747282,38747325-387474... 62 3e-10
12_01_0759 + 6894556-6894628,6894653-6894738,6895039-6895121,689... 58 8e-09
12_01_0763 + 6931678-6931911,6932161-6932172 37 0.012
08_02_1446 + 27156449-27156790,27157961-27158042,27158698-271587... 29 4.1
09_04_0500 - 18120287-18122233 28 7.2
02_02_0662 - 12736904-12737214,12737632-12737914 28 7.2
06_01_0368 + 2645007-2645317,2645422-2645509,2648927-2649183,264... 27 9.5
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 27 9.5
01_06_1540 - 38111557-38111985,38112087-38112311,38112494-381128... 27 9.5
>04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787
Length = 345
Score = 103 bits (247), Expect = 1e-22
Identities = 74/203 (36%), Positives = 97/203 (47%), Gaps = 14/203 (6%)
Frame = +1
Query: 70 RKYVVKNHFKGVPKQEDYELVEFV------IPPLIDGEVLVKAEWISVDPYLRA-YNSYQ 228
+K V++NH G PK+ D ELV +P DG VLVK ++S DPY+R +S+
Sbjct: 6 KKIVLRNHVTGFPKESDMELVAATGAAPSRVPEGTDGAVLVKNLYLSCDPYMRGRMSSHD 65
Query: 229 AVPYDQF-------SYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRI 387
D F Y VG VV S + G V GW ++ + P+ I
Sbjct: 66 GSYVDAFVVGEAITGYGVGKVVDSSHPGFKAGDLVWGMTGWEEYSLIK---DPSRALFAI 122
Query: 388 YKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKI 567
+ PDL S G +GM G TAY GF EIC P+ LVGQ AK+
Sbjct: 123 -RHPDLP---LSYYTGLLGMAGFTAYVGFHEICAPREGERVYVSAASGAVGQLVGQFAKL 178
Query: 568 KGCRVIGFAGTDDKVKWLEEELG 636
GC V+G AG+DDKV+ L E+ G
Sbjct: 179 MGCYVVGSAGSDDKVRLLREKFG 201
>12_01_0760 +
6910325-6910558,6911305-6911455,6911949-6912115,
6912227-6912309,6912395-6912773
Length = 337
Score = 93.5 bits (222), Expect = 1e-19
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 4/195 (2%)
Frame = +1
Query: 64 SARKYVVKNHFKGVPKQEDYELVEFVIPPLI----DGEVLVKAEWISVDPYLRAYNSYQA 231
S ++ ++K + G+ ++D E+V PPL V+VK ++S DPY+R ++
Sbjct: 7 SNKRVILKRYVTGLLSEDDMEVVTVEAPPLDVPTGSKGVVVKNLYVSCDPYMRNRMTHHE 66
Query: 232 VPYDQFSYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQG 411
+P + G V+ S ++ G V GW ++ V N P+ ++K+ +
Sbjct: 67 LPSYIPDFVPGEVISSGHLDFKAGDLVWGMTGWEEYTVI------NNPES-LFKINHPE- 118
Query: 412 LSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGF 591
L S G +GMPG TAY GF ++ KPK +VGQ+AKI GC VIG
Sbjct: 119 LPLSYYTGILGMPGLTAYAGFFDVPKPKKGEYVFISGASGAVGQVVGQLAKITGCYVIGS 178
Query: 592 AGTDDKVKWLEEELG 636
AG D+KV L+ + G
Sbjct: 179 AGYDEKVNLLKSKFG 193
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 90.6 bits (215), Expect = 9e-19
Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Frame = +1
Query: 67 ARKYVVKNHFKGVPKQEDYELVEFVIPPLID-GEVLVKAEWISVDPYL-----RAYNSYQ 228
+R V++H +G+P ++D+E+ + + GEVLV+ ++SVDPY R S+
Sbjct: 5 SRYVAVRHHVEGLPSEDDFEVKAARVRWWPESGEVLVRNLYLSVDPYQLNRMKRRSASHL 64
Query: 229 AV----PYDQF-SYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYK 393
AV P ++ +Y G VV S Y G V GW D+ +F PS P + K
Sbjct: 65 AVDGIVPGERIDAYGAGEVVASACEEYKEGDVVAGVLGWEDYTLFRPS-----PGVLMSK 119
Query: 394 LPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKG 573
L L S + A+G G TAY G E+ +P+ SLVGQ AK+ G
Sbjct: 120 LAASDDLPLSHHLSALGTSGMTAYAGLYEVGRPEAGEKVFVSAASGSVGSLVGQFAKLAG 179
Query: 574 CRVIGFAGTDDKVKWLEEELG 636
C V+G AGT+ KV L+ +LG
Sbjct: 180 CYVVGCAGTNAKVDLLKNKLG 200
>12_01_0756 +
6869100-6869327,6869943-6870123,6870233-6870399,
6870523-6870605,6870716-6871094
Length = 345
Score = 87.8 bits (208), Expect = 6e-18
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Frame = +1
Query: 70 RKYVVKNHFKGVPKQEDYELVEF---VIPPLIDGEVLVKAEWISVDPYLRAYNSYQAVPY 240
R+ ++K + G+P ++D E+V + P V+VK ++S DPY+R + VP
Sbjct: 8 RRVILKRYVTGLPSEDDMEVVTAKTTLAVPAGSEAVMVKNLYVSCDPYMRGRMTRHEVPS 67
Query: 241 DQFSYQVGVV---------VQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYK 393
Y G V V S ++ G V GW ++ T N PK ++K
Sbjct: 68 YVPDYVPGEVITNCGVMKVVSSGHPDFKDGDLVWGVTGWEEY------TLVNNPKPYLHK 121
Query: 394 LPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKG 573
+ + S G +G+ G TAY GF E+ KPK +VGQ+AKI G
Sbjct: 122 I-NYPEFPLSYYTGVLGIAGLTAYGGFFEVSKPKKGDYVFVSAASGAVGQIVGQLAKITG 180
Query: 574 CRVIGFAGTDDKVKWLEEELG 636
C V+G AG+D+KVK L+ + G
Sbjct: 181 CYVVGSAGSDEKVKLLKTKFG 201
>12_01_0762 +
6915299-6915532,6916043-6916220,6916490-6916656,
6916770-6916852,6916940-6917318
Length = 346
Score = 86.2 bits (204), Expect = 2e-17
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Frame = +1
Query: 64 SARKYVVKNHFKGVPKQEDYELVEFVIPPLI-----DGEVLVKAEWISVDPYLRAYNSYQ 228
S ++ ++K + G+ ++D E+V +PPL V+VK ++S DPY+R +
Sbjct: 6 SNKRVILKRYVTGLLSEDDMEVVTTEVPPLAVVPAGSEAVVVKNLYVSCDPYMRNRMTRH 65
Query: 229 AVP--YDQF-------SYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKD 381
VP F ++ V V+ S ++ G V GW ++ V N P+
Sbjct: 66 EVPSYVSDFIPGEVLANFGVMRVISSGHPDFKAGDLVWGITGWEEYTVI------NNPES 119
Query: 382 RIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIA 561
++++ + L S G +GMPG TAY GF E+ KPK +VGQ+A
Sbjct: 120 -LFRINHPK-LPLSYYTGILGMPGLTAYAGFFEVSKPKKGEYVFISAASGAVGQIVGQLA 177
Query: 562 KIKGCRVIGFAGTDDKVKWLEEELG 636
KI GC V+G AG+D+KV L+ + G
Sbjct: 178 KIIGCYVVGSAGSDEKVSLLKTKFG 202
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 74.1 bits (174), Expect = 8e-14
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Frame = +1
Query: 49 KVEMTSARKYVVKNHFK-GVPKQEDYELVEFVIPPLID-----GEVLVKAEWISVDPYLR 210
++EM RK V++ + G P +D E+V + P + V+VK ++S DP++R
Sbjct: 10 EMEMVRNRKVVLRRYVTAGYPTVDDMEVVSSTMMPRVPLGTMAPAVMVKNIYLSCDPWMR 69
Query: 211 A----YNSYQAVPYDQF-------SYQVGVVVQSRDSNYPVGTRVVAHKGWCDHYVFTPS 357
++ A + F ++ V VV S + G V GW ++ + T
Sbjct: 70 GRMTKHDDATAEIAEDFVLGEAMVNFGVSKVVDSTHPVFAAGDLVWGLCGWEEYSLIT-- 127
Query: 358 TQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXX 537
QP T ++K+ + L S G +G+ G TAY F E+ KPK
Sbjct: 128 -QPET----LHKI-NHPDLPLSYYTGVLGVTGLTAYAAFFEVGKPKKGETVFVSAASGAV 181
Query: 538 XSLVGQIAKIKGCRVIGFAGTDDKVKWLEEELG 636
+VGQ+AKI GC V+G AG+D+KV L+ + G
Sbjct: 182 GQIVGQLAKIAGCYVVGSAGSDEKVTLLKTKFG 214
>12_01_0764 +
6934570-6934726,6935150-6935316,6935408-6935490,
6935588-6935966
Length = 261
Score = 70.5 bits (165), Expect = 1e-12
Identities = 43/123 (34%), Positives = 62/123 (50%)
Frame = +1
Query: 268 VVQSRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGM 447
V+ S ++ G V GW ++ V N P + ++K+ + L S G +GM
Sbjct: 3 VISSGHQDFKAGDLVWGITGWEEYTVI------NNP-ETLFKINHPE-LPLSYYTGILGM 54
Query: 448 PGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWLEE 627
PG TAY GF E+ KPK +VGQ+AKI GC V+G AG+D+KV L+
Sbjct: 55 PGLTAYGGFFEVAKPKKGEYVFISSAFGAVGQIVGQLAKITGCYVVGSAGSDEKVNLLKT 114
Query: 628 ELG 636
+ G
Sbjct: 115 KFG 117
>01_06_1628 +
38745964-38746480,38747116-38747282,38747325-38747440,
38747718-38748114
Length = 398
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +1
Query: 421 SLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGT 600
S +G +GMPG TAY GF EIC PK +VGQ+AK+ GC V+G AGT
Sbjct: 166 SYHLGLLGMPGFTAYAGFYEICSPKKGEFVFVSAASGAVGQIVGQLAKLHGCYVVGSAGT 225
Query: 601 DDKV 612
+ K+
Sbjct: 226 NQKM 229
>12_01_0759 +
6894556-6894628,6894653-6894738,6895039-6895121,
6895278-6895650
Length = 204
Score = 57.6 bits (133), Expect = 8e-09
Identities = 31/65 (47%), Positives = 38/65 (58%)
Frame = +1
Query: 442 GMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWL 621
GM G TAY GF E+ KPK +VGQ+AKIKGC V+G AG+DDKV L
Sbjct: 6 GMHGLTAYVGFFEMSKPKKACGAIG--------QIVGQLAKIKGCYVVGSAGSDDKVNLL 57
Query: 622 EEELG 636
+ + G
Sbjct: 58 KTKFG 62
>12_01_0763 + 6931678-6931911,6932161-6932172
Length = 81
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 58 MTSARKYVVKNHFKGVPKQEDYELVEFVIPPLI----DGEVLVKAEWISVDPYLRAYNSY 225
+ S ++ ++K + G+ ++D E+V PPL V+VK +IS DPY+R +Y
Sbjct: 5 VVSNKRVILKRYVTGLVSEDDMEVVTVEAPPLAVPAGSKTVVVKNLYISCDPYMRNRMTY 64
Query: 226 QAVP 237
P
Sbjct: 65 HEEP 68
>08_02_1446 +
27156449-27156790,27157961-27158042,27158698-27158792,
27159421-27159492,27159572-27159651,27159728-27159827,
27160064-27160141,27160408-27160455,27160570-27160638,
27161035-27161175,27161262-27161516
Length = 453
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 277 SRDSNYPVGTRVVAHKGWCDHYVFTPSTQPNTPK 378
SRD+N+P+GT H DH PS P P+
Sbjct: 402 SRDANHPIGTPPSNHSALADH----PSKPPPGPR 431
>09_04_0500 - 18120287-18122233
Length = 648
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 364 PNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAY 465
PN PK + K L GL S+ VG G+ AY
Sbjct: 185 PNNPKGFVGKTLGLPGLKRSVPVGETGLREVAAY 218
>02_02_0662 - 12736904-12737214,12737632-12737914
Length = 197
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +1
Query: 349 TPSTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMP 450
+P +P K YK LSPSL V AVG+P
Sbjct: 18 SPLPEPPPAKPGSYKHGGSGALSPSLAVKAVGVP 51
>06_01_0368 +
2645007-2645317,2645422-2645509,2648927-2649183,
2649453-2649504,2649527-2649838
Length = 339
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 469 QNRQSRPASQPPLRPATATIPADLVVYKYD 380
Q + P++ PP AT +P+D + Y D
Sbjct: 291 QTQDQPPSTPPPDTRATRAVPSDCITYSQD 320
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 457 SRPASQPPLRPATATIPADLVVYKYDPLE 371
+RPA QPP P T +P ++++ P +
Sbjct: 725 ARPAQQPPRPPVTQPLPPPPPLHQHQPYQ 753
>01_06_1540 -
38111557-38111985,38112087-38112311,38112494-38112854,
38112965-38113058,38113136-38113369,38113891-38113945
Length = 465
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 483 LQAKSWRDRGGHRSGRCCGITCRSNS 560
L W GGH SGR G T S+S
Sbjct: 196 LSVAEWVSHGGHLSGRIQGATAASSS 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.137 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,962,545
Number of Sequences: 37544
Number of extensions: 355590
Number of successful extensions: 1082
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1073
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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