Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5d08
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical p... 182 2e-46
Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical pr... 178 3e-45
U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical pr... 140 1e-33
AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical ... 138 4e-33
Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical pr... 88 5e-18
Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical pr... 88 6e-18
AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical ... 77 1e-14
AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical ... 66 3e-11
AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical ... 60 2e-09
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p... 28 6.8
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 28 6.8
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ... 28 6.8
AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical... 28 6.8
U29612-4|AAA68803.1| 326|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical
protein F26E4.12 protein.
Length = 163
Score = 182 bits (443), Expect = 2e-46
Identities = 86/158 (54%), Positives = 115/158 (72%), Gaps = 2/158 (1%)
Frame = +2
Query: 116 TSIHEFTVKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRI 295
+S+++F VKN G+DV L YKG V IIVNVASQCGLT NY QL EL + Y + GL +
Sbjct: 2 SSVYDFNVKNANGDDVSLSDYKGKVLIIVNVASQCGLTNKNYTQLKELLDVY-KKDGLEV 60
Query: 296 LAFPCNQFAGQEPGNPEEIVCFASERKVKFD--LFEKVDVNGDNASPLWKYLKHKQGGTL 469
LAFPCNQFAGQEP +I F ++ K KF+ LF+K+DVNGD SPL+K+LK+++GG +
Sbjct: 61 LAFPCNQFAGQEPSCEIDIQAFVAD-KFKFEPTLFQKIDVNGDKQSPLFKFLKNEKGGFM 119
Query: 470 GSFIKWNFTKFIINKDGVPVERHGPNTDPLDLVKSLEK 583
IKWNFTKF++ +DG ++R GP TDP D+ K +++
Sbjct: 120 FDAIKWNFTKFLVGRDGKIIKRFGPTTDPKDMEKDIKE 157
>Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical
protein R05H10.5 protein.
Length = 163
Score = 178 bits (433), Expect = 3e-45
Identities = 84/156 (53%), Positives = 110/156 (70%), Gaps = 2/156 (1%)
Frame = +2
Query: 119 SIHEFTVKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRIL 298
S+H TVKN +GED L Y+G V IIVNVASQCGLT +NY Q EL + Y + GL +L
Sbjct: 3 SVHGITVKNAQGEDTPLSNYQGKVLIIVNVASQCGLTNSNYNQFKELLDVY-KKDGLEVL 61
Query: 299 AFPCNQFAGQEPGNPEEIVCFASERKVKFD--LFEKVDVNGDNASPLWKYLKHKQGGTLG 472
AFPCNQF GQEP +I F ++ K KF+ LF+K+DVNGDN +PL+K+LK ++GG L
Sbjct: 62 AFPCNQFGGQEPSCEIDIAAFVAD-KFKFEPTLFQKIDVNGDNTAPLYKFLKQEKGGFLV 120
Query: 473 SFIKWNFTKFIINKDGVPVERHGPNTDPLDLVKSLE 580
IKWNFTKF++ +DG ++R P T+P D+ K +E
Sbjct: 121 DAIKWNFTKFLVGRDGHVIKRFSPTTEPKDMKKDIE 156
>U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical
protein R03G5.5 protein.
Length = 193
Score = 140 bits (338), Expect = 1e-33
Identities = 80/170 (47%), Positives = 108/170 (63%), Gaps = 5/170 (2%)
Frame = +2
Query: 119 SIHEFTVKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRIL 298
+I++F+V++ G+ V LD Y G V IIVNVAS CGLT +NYK+L L ++Y +GLR+
Sbjct: 32 TIYDFSVRDNSGDLVSLDKYSGLVVIIVNVASYCGLTNSNYKELKSLNDKY-HLRGLRVA 90
Query: 299 AFPCNQFAGQEPGNPEEIVCFASER-KVKFDLFEKVDVNGD----NASPLWKYLKHKQGG 463
AFPCNQF Q +I F +E+ + DL+ KV VNG PLW +LK +QGG
Sbjct: 91 AFPCNQFGFQAC----DINKFVNEKFSFEPDLYGKVTVNGGPLIGEEEPLWTFLKKEQGG 146
Query: 464 TLGSFIKWNFTKFIINKDGVPVERHGPNTDPLDLVKSLEKYW*KILAQTK 613
TL IKWNFTKF++N+ G V R GP+T+P KS E+ K+L + K
Sbjct: 147 TLFDAIKWNFTKFLVNRQGKVVARFGPSTNP----KSFEEEIVKLLDENK 192
>AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical
protein T09A12.2b protein.
Length = 188
Score = 138 bits (333), Expect = 4e-33
Identities = 65/156 (41%), Positives = 98/156 (62%), Gaps = 1/156 (0%)
Frame = +2
Query: 119 SIHEFTVKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRIL 298
+I++F KNI G+ V ++ Y+ V + NVAS CG T +NY EL Y E KG R+
Sbjct: 30 TIYQFQAKNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYRE-KGFRVA 88
Query: 299 AFPCNQFAGQEPGNPEEIVCFA-SERKVKFDLFEKVDVNGDNASPLWKYLKHKQGGTLGS 475
AFPCNQF QEP +I+ F S D++ K++VNG N PLWK+LK ++G +L +
Sbjct: 89 AFPCNQFEKQEPETEGKILDFVKSSYTYAPDMYSKIEVNGQNTHPLWKFLKKERGSSLSA 148
Query: 476 FIKWNFTKFIINKDGVPVERHGPNTDPLDLVKSLEK 583
I WNF+KF+++K+G V R+ + +P+DL + + +
Sbjct: 149 DIPWNFSKFLVDKNGHVVGRYSHSVNPIDLEEEISR 184
>Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical
protein C11E4.1 protein.
Length = 223
Score = 88.2 bits (209), Expect = 5e-18
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 23/165 (13%)
Frame = +2
Query: 119 SIHEFTVKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRIL 298
SI++F V+ ++GE L Y+G V ++VNVA+ C T Y N L E+Y +S+G ++
Sbjct: 39 SIYDFQVETLQGEYTDLSQYRGQVLLMVNVATFCAYT-QQYTDFNPLIEKY-QSQGFTLI 96
Query: 299 AFPCNQFAGQEPGNPEEI---VCFAS-----ERKVKFDLFEKVDVNGDNASPLWKYLKH- 451
AFPCNQF QEP E+ + + + ++ K+D NGDN P+++++K
Sbjct: 97 AFPCNQFYLQEPAENHELMNGIMYVRPGNGWKPHQNLHIYGKLDTNGDNQHPIYEFVKES 156
Query: 452 ------KQGGT--------LGSFIKWNFTKFIINKDGVPVERHGP 544
K G T S I WNF KF+I+++G P R P
Sbjct: 157 CPQTVDKIGKTDELMYNPIRASDITWNFEKFLIDRNGQPRFRFHP 201
>Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical
protein C11E4.2 protein.
Length = 224
Score = 87.8 bits (208), Expect = 6e-18
Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 23/165 (13%)
Frame = +2
Query: 119 SIHEFTVKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRIL 298
SI +F ++ ++GE L Y+G V ++VNVA+ C T Y N + E+Y +++GL ++
Sbjct: 40 SIFDFQIETLQGEYTDLSQYRGKVILLVNVATFCAYT-QQYTDFNPMLEKY-QAQGLTLV 97
Query: 299 AFPCNQFAGQEPGNPEEIVCFASERK--------VKFDLFEKVDVNGDNASPLWKYLKH- 451
AFPCNQF QEP E++ + + + ++ K+DVNGDN PL++++K
Sbjct: 98 AFPCNQFYLQEPAENHELMNGLTYVRPGNGWTPHQELHIYGKIDVNGDNHHPLYEFVKES 157
Query: 452 ------KQGGT--------LGSFIKWNFTKFIINKDGVPVERHGP 544
K G T S I WNF KF+I+++G P R P
Sbjct: 158 CPQTVDKIGKTDELMYNPVRPSDITWNFEKFLIDRNGQPRFRFHP 202
>AF047660-3|AAC04432.2| 125|Caenorhabditis elegans Hypothetical
protein T09A12.2a protein.
Length = 125
Score = 76.6 bits (180), Expect = 1e-14
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +2
Query: 119 SIHEFTVKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRIL 298
+I++F KNI G+ V ++ Y+ V + NVAS CG T +NY EL Y E KG R+
Sbjct: 30 TIYQFQAKNIDGKMVSMEKYRDKVVLFTNVASYCGYTDSNYNAFKELDGIYRE-KGFRVA 88
Query: 299 AFPCNQFAGQEPGNPEEIVCFA-SERKVKFDLFEKV 403
AFPCNQF QEP +I+ F S D++ KV
Sbjct: 89 AFPCNQFEKQEPETEGKILDFVKSSYTYAPDMYSKV 124
>AC024876-1|AAF60893.2| 126|Caenorhabditis elegans Hypothetical
protein Y94H6A.4 protein.
Length = 126
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +2
Query: 119 SIHEFTVKNIKGEDVKLDVYKGHVCIIVNVASQCGLTANNYKQLNELYEQYGESKGLRIL 298
S+ +F ++ +KG+ L Y+G V ++VNVA+ C T Y N + ++Y + +GL I
Sbjct: 39 SVFDFQIETLKGDYTDLSQYRGKVTLLVNVATFCAYT-QQYTDFNPILDKY-QKQGLVIA 96
Query: 299 AFPCNQFAGQEPGNPEEIV 355
AFPCNQF QEP E++
Sbjct: 97 AFPCNQFYLQEPAENHELL 115
>AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical
protein F55A3.5 protein.
Length = 145
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/97 (38%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Frame = +2
Query: 293 ILAFPCNQFAGQEPGNPEEIVCFASERKVKFDLFEKVDVNGDNASPLWKYLKH------- 451
IL FPCNQ +E ++ F K + +++K+DVNG N PL+K LK
Sbjct: 33 ILVFPCNQSNNEESSWESDLPYFF---KYQPKIYQKIDVNGVNTDPLYKLLKKVNVVTLG 89
Query: 452 KQGGTLGSFIKWNFTKFIINKDGVPVERHGPNTDPLD 562
G LG I +NFTKF + KDG ++R T P D
Sbjct: 90 DSIGILGDSICYNFTKFFVGKDGHVIKRFCRTTLPKD 126
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical
protein C41A3.1 protein.
Length = 7829
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 185 HVCIIVNVASQCGLTAN-NYKQLNELYEQYGESKGLRILAFPCNQFAGQEPGNPEEIVCF 361
+ C I+ + L +Y + N L+ + L++ QF Q E+I+
Sbjct: 389 NACAIIEKPEKPSLVQKESYAESNVLFLSAKSHESLKLQIEEYTQFMAQSDSAMEDILYT 448
Query: 362 ASERKVKFD 388
+ERK K+D
Sbjct: 449 VNERKTKYD 457
>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 389 LFEKVDVNGDNASPLWKYLKHKQGGTLGSFIKWNFTKFIINKDGV 523
+ E V++N A+P++ YL+H + + + +F KF N D +
Sbjct: 1260 VLENVEMNIGGANPMYTYLEHHRARYINDHVD-DFEKFRRNLDNL 1303
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical
protein C23F12.1a protein.
Length = 2329
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 496 GKVPLDEATKGASLLMLQILPQWTGIVSIDINF 398
GKVP + +GA ++ +PQ G ID+ F
Sbjct: 159 GKVPNNVQMQGAGRCLVTFIPQHAGTYVIDVTF 191
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical
protein C23F12.1b protein.
Length = 2747
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 496 GKVPLDEATKGASLLMLQILPQWTGIVSIDINF 398
GKVP + +GA ++ +PQ G ID+ F
Sbjct: 159 GKVPNNVQMQGAGRCLVTFIPQHAGTYVIDVTF 191
>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
protein M01G12.12 protein.
Length = 1579
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 389 LFEKVDVNGDNASPLWKYLKHKQGGTLGSFIKWNFTKFIINKDGV 523
+ E V++N A+P++ YL+H + + + +F KF N D +
Sbjct: 1260 VLENVEMNIGGANPMYTYLEHHRARYINDHVD-DFEKFRRNLDNL 1303
>AF039047-12|AAM15590.1| 226|Caenorhabditis elegans Hypothetical
protein K11D12.12 protein.
Length = 226
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 133 YSQKH*R*RREAGCLQRPCLYHCECC 210
+S+K R E GCL +P L+ C C
Sbjct: 139 FSRKFNLERHEDGCLPKPILFQCPIC 164
>U29612-4|AAA68803.1| 326|Caenorhabditis elegans Hypothetical
protein C09B8.5 protein.
Length = 326
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +2
Query: 104 YKAATSIHEFTVKNIKGE-DVKLDV----YKGHVCIIVNVASQCGLTANNYK 244
Y A + H F ++N+K E V+++V +KG C+ +++ + L + YK
Sbjct: 233 YTATSHDHNFVLRNLKSELRVRINVRKTNWKGRNCLTIDMEGEKELVISWYK 284
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,515,594
Number of Sequences: 27780
Number of extensions: 303972
Number of successful extensions: 875
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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