Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5d07
         (271 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104763-1|AAI04764.1| 1070|Homo sapiens KIAA0355 protein.             27   8.1  
BC104761-1|AAI04762.1| 1070|Homo sapiens KIAA0355 protein.             27   8.1  
AB002353-1|BAA20812.2| 1082|Homo sapiens KIAA0355 protein.             27   8.1  

>BC104763-1|AAI04764.1| 1070|Homo sapiens KIAA0355 protein.
          Length = 1070

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 251 GRDPASPRGDWRPPRGDA 198
           GR P +PRG+W PP  DA
Sbjct: 867 GRRPGNPRGNW-PPMDDA 883


>BC104761-1|AAI04762.1| 1070|Homo sapiens KIAA0355 protein.
          Length = 1070

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 251 GRDPASPRGDWRPPRGDA 198
           GR P +PRG+W PP  DA
Sbjct: 867 GRRPGNPRGNW-PPMDDA 883


>AB002353-1|BAA20812.2| 1082|Homo sapiens KIAA0355 protein.
          Length = 1082

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 251 GRDPASPRGDWRPPRGDA 198
           GR P +PRG+W PP  DA
Sbjct: 879 GRRPGNPRGNW-PPMDDA 895


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.315    0.129    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,425,677
Number of Sequences: 237096
Number of extensions: 230067
Number of successful extensions: 1533
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 76,859,062
effective HSP length: 67
effective length of database: 60,973,630
effective search space used: 1341419860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)