Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5d05
         (318 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GGP3 Cluster: Hybrid nonribosomal peptide synthetase ...    36   0.17 
UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;...    34   0.53 
UniRef50_Q0RI59 Cluster: Non-ribosomal peptide synthetase; n=3; ...    33   0.93 
UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1; ...    33   1.2  
UniRef50_Q9F5J4 Cluster: SimH; n=5; Streptomyces|Rep: SimH - Str...    32   2.1  
UniRef50_Q4ZT75 Cluster: Amino acid adenylation; n=2; Pseudomona...    32   2.8  
UniRef50_Q63MA9 Cluster: Family S58 unassigned peptidase; n=40; ...    31   3.8  
UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep: D-...    31   3.8  
UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2; ...    31   3.8  
UniRef50_A4I4B2 Cluster: Putative uncharacterized protein; n=3; ...    31   5.0  
UniRef50_Q0HPV3 Cluster: MATE efflux family protein; n=12; Shewa...    31   6.6  

>UniRef50_Q8GGP3 Cluster: Hybrid nonribosomal peptide synthetase /
            polyketide synthase; n=12; root|Rep: Hybrid nonribosomal
            peptide synthetase / polyketide synthase - Streptomyces
            atroolivaceus
          Length = 4437

 Score = 35.9 bits (79), Expect = 0.17
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 107  RDDGCGGRNISLYLVARKGGSPTARSSRRESAKIVAEH 220
            R+DGCG R +  YLVA  G +P+ R  R  + + + E+
Sbjct: 1416 REDGCGDRTLVAYLVALPGSAPSGRELRGFAGQTLPEY 1453


>UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 774

 Score = 34.3 bits (75), Expect = 0.53
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 245 NKIIFPLHYVLLLSSPIRALSSVRWGNLPFLPPS-KEKCSDRHNRH 111
           NK + P  Y  + SSP+   S+   GNL FL  S  ++  D HN H
Sbjct: 689 NKSVLPSIYSSMQSSPLSTSSTTSKGNLSFLVSSNNDEDDDHHNHH 734


>UniRef50_Q0RI59 Cluster: Non-ribosomal peptide synthetase; n=3;
           cellular organisms|Rep: Non-ribosomal peptide synthetase
           - Frankia alni (strain ACN14a)
          Length = 1531

 Score = 33.5 bits (73), Expect = 0.93
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 107 RDDGCGGRNISLYLVARKGGSPTARSSRRESAKIVAEH 220
           R DG GGR ++ YLV   G  P A + R  +A  + +H
Sbjct: 877 RTDGPGGRYLAAYLVLADGAQPDAAALRAHAAATLPDH 914


>UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1;
           Pelodictyon luteolum DSM 273|Rep: Putative
           uncharacterized protein - Pelodictyon luteolum (strain
           DSM 273) (Chlorobium luteolum (strain DSM273))
          Length = 427

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -2

Query: 257 YYFANKIIFPLHYVLLLSSPIRALSSVRWGNLPFL 153
           Y FANK +F ++Y+L+ S  I  L SV +G + F+
Sbjct: 74  YPFANKPVFWVYYILIFSIGIGILHSVAYGAIAFM 108


>UniRef50_Q9F5J4 Cluster: SimH; n=5; Streptomyces|Rep: SimH -
           Streptomyces antibioticus
          Length = 997

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 107 RDDGCGGRNISLYLVARKGGSPTARSSRRESAKIVAE 217
           R+DG GGR I ++L+   G +PT    R  + + + +
Sbjct: 835 REDGAGGRRIVVHLIPSAGAAPTMAELREHAGRFLPD 871


>UniRef50_Q4ZT75 Cluster: Amino acid adenylation; n=2; Pseudomonas
            syringae pv. syringae|Rep: Amino acid adenylation -
            Pseudomonas syringae pv. syringae (strain B728a)
          Length = 9498

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +2

Query: 107  RDDGCGGRNISLYLVARKGGSPTARSSRRESAKIVAEH 220
            R+D  G + +  YL+A  G +P +   R + A ++AEH
Sbjct: 7412 REDRPGDKRLVAYLIAEDGAAPESALLRSQLASVLAEH 7449


>UniRef50_Q63MA9 Cluster: Family S58 unassigned peptidase; n=40;
           Bacteria|Rep: Family S58 unassigned peptidase -
           Burkholderia pseudomallei (Pseudomonas pseudomallei)
          Length = 376

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 175 GGGTSLSCHQVKRNVPTATTVIAPSA 98
           GGGT + CH+ K  + TA+ ++A +A
Sbjct: 168 GGGTGMICHEFKGGIGTASRIVAEAA 193


>UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep:
           D-aminopeptidase - Myxococcus xanthus (strain DK 1622)
          Length = 419

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 175 GGGTSLSCHQVKRNVPTATTVIAPSAIALAADVLLPC 65
           GGGT + CH  K  + TA+  +  S       VLL C
Sbjct: 198 GGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQC 234


>UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 353

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = +2

Query: 110 DDGCGGRNISLYLVARKGGSPTARSSRRESAKIVAEHSAAEK*FCSQNNTYVYT 271
           D GCG  ++SLYL  R   S     S   + KI  +  AAE+ F   NN  V+T
Sbjct: 125 DLGCGWGSLSLYLAERYPNSRIYALSNSRTQKIYIDSIAAERGF---NNLEVHT 175


>UniRef50_A4I4B2 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania infantum
          Length = 578

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = -3

Query: 181 PCGGGTSLSCHQVKRNVPTATTVIAPSAIALAADVLLPCELEFLVIAKWQ 32
           PCG    L+CH      P   TV  P A   +  V  PC  ++L  ++W+
Sbjct: 323 PCGHLCWLTCHDETPCAPCKETVTVPCACG-SRHVSCPCFCQYLPESEWE 371


>UniRef50_Q0HPV3 Cluster: MATE efflux family protein; n=12;
           Shewanella|Rep: MATE efflux family protein - Shewanella
           sp. (strain MR-7)
          Length = 456

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 45  MTKNSNSQGSNTSAANAIALGAMTVVAVGTFLFTWWQEREVPPPHGAQ 188
           MT +    G NT AANA+ L  + ++A       ++ E EV   +G Q
Sbjct: 267 MTFHGAGLGDNTVAANAVLLNLLLLIAYALDGIAYYAEAEVGKAYGQQ 314


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,454,373
Number of Sequences: 1657284
Number of extensions: 5829380
Number of successful extensions: 16642
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16638
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)