Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5d03
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   1.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   1.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.3  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.9  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 587 WVSSASWYFLNVFGLRTIYALVL 655
           W+SS S Y   +FG  TI+  ++
Sbjct: 80  WLSSTSIYAYFIFGAETIFVTMV 102


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 587 WVSSASWYFLNVFGLRTIYALVL 655
           W+SS S Y   +FG  TI+  ++
Sbjct: 80  WLSSTSIYAYFIFGAETIFVTMV 102


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 487 HPVNPSSDDNHRQDICQI 434
           H +N   +DN + ++C+I
Sbjct: 237 HSINLLEEDNQKPNVCRI 254


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 575 LDASWVSSASWY 610
           L+  W S+ SWY
Sbjct: 109 LEIGWASTVSWY 120


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 575 LDASWVSSASWY 610
           L+  W S+ SWY
Sbjct: 109 LEIGWASTVSWY 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,498
Number of Sequences: 336
Number of extensions: 3588
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)