Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5d03
         (672 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK222953-1|BAD96673.1|  219|Homo sapiens 30 kDa protein variant ...   303   5e-82
BC022807-1|AAH22807.1|  261|Homo sapiens transmembrane protein 1...   302   6e-82
AF157321-1|AAF67487.1|  261|Homo sapiens 30 kDa protein protein.      302   6e-82
AK172843-1|BAD18807.1|  221|Homo sapiens protein ( Homo sapiens ...   299   4e-81

>AK222953-1|BAD96673.1|  219|Homo sapiens 30 kDa protein variant
           protein.
          Length = 219

 Score =  303 bits (743), Expect = 5e-82
 Identities = 136/189 (71%), Positives = 163/189 (86%)
 Frame = +2

Query: 104 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 283
           PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRILRE 63

Query: 284 NGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMIV 463
           NGKY+P+QSF  R+++FNN E G+FK  KR     +PMTDP M+TDM+KGN+TNVLPMI+
Sbjct: 64  NGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMIL 123

Query: 464 IGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTIY 643
           IGGWIN  FSGF+TTKVPFPLTLRFKPMLQ+G+EL  LDASWVSSASWYFLNVFGLR+IY
Sbjct: 124 IGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIY 183

Query: 644 ALVLGENNA 670
           +L+LG++NA
Sbjct: 184 SLILGQDNA 192


>BC022807-1|AAH22807.1|  261|Homo sapiens transmembrane protein 111
           protein.
          Length = 261

 Score =  302 bits (742), Expect = 6e-82
 Identities = 136/189 (71%), Positives = 163/189 (86%)
 Frame = +2

Query: 104 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 283
           PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63

Query: 284 NGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMIV 463
           NGKY+P+QSF  R+++FNN E G+FK  KR     +PMTDP M+TDM+KGN+TNVLPMI+
Sbjct: 64  NGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMIL 123

Query: 464 IGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTIY 643
           IGGWIN  FSGF+TTKVPFPLTLRFKPMLQ+G+EL  LDASWVSSASWYFLNVFGLR+IY
Sbjct: 124 IGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIY 183

Query: 644 ALVLGENNA 670
           +L+LG++NA
Sbjct: 184 SLILGQDNA 192


>AF157321-1|AAF67487.1|  261|Homo sapiens 30 kDa protein protein.
          Length = 261

 Score =  302 bits (742), Expect = 6e-82
 Identities = 136/189 (71%), Positives = 163/189 (86%)
 Frame = +2

Query: 104 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 283
           PELLLD NIR WV LPIVIITF VG++RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGMIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63

Query: 284 NGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMIV 463
           NGKY+P+QSF  R+++FNN E G+FK  KR     +PMTDP M+TDM+KGN+TNVLPMI+
Sbjct: 64  NGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMIL 123

Query: 464 IGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTIY 643
           IGGWIN  FSGF+TTKVPFPLTLRFKPMLQ+G+EL  LDASWVSSASWYFLNVFGLR+IY
Sbjct: 124 IGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWYFLNVFGLRSIY 183

Query: 644 ALVLGENNA 670
           +L+LG++NA
Sbjct: 184 SLILGQDNA 192


>AK172843-1|BAD18807.1|  221|Homo sapiens protein ( Homo sapiens
           cDNA FLJ24004 fis, clone KAT01090, highly similar to
           Homo sapiens 30 kDa protein (LOC55831). ).
          Length = 221

 Score =  299 bits (735), Expect = 4e-81
 Identities = 135/189 (71%), Positives = 162/189 (85%)
 Frame = +2

Query: 104 PELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLRE 283
           PELLLD NIR WV LPIVIITF VG +RHYVS++L S KK+   QV DSQV+IR+R+LRE
Sbjct: 4   PELLLDSNIRLWVVLPIVIITFFVGTIRHYVSILLQSDKKLTQEQVSDSQVLIRSRVLRE 63

Query: 284 NGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMIV 463
           NGKY+P+QSF  R+++FNN E G+FK  KR     +PMTDP M+TDM+KGN+TNVLPMI+
Sbjct: 64  NGKYIPKQSFLTRKYYFNNPEDGFFKKTKRKVVPPSPMTDPTMLTDMMKGNVTNVLPMIL 123

Query: 464 IGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTIY 643
           IGGWIN  FSGF+TTKVPFPLTLRFKPMLQ+G+EL  LDASWVSSASW+FLNVFGLR+IY
Sbjct: 124 IGGWINMTFSGFVTTKVPFPLTLRFKPMLQQGIELLTLDASWVSSASWHFLNVFGLRSIY 183

Query: 644 ALVLGENNA 670
           +L+LG++NA
Sbjct: 184 SLILGQDNA 192


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,714,179
Number of Sequences: 237096
Number of extensions: 1944137
Number of successful extensions: 3406
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3406
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)