Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5d03
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118958-1|AAM50818.1|  247|Drosophila melanogaster LD37839p pro...   322   2e-88
AE014134-1941|AAF53000.1|  247|Drosophila melanogaster CG6750-PA...   322   2e-88
L31626-1|AAA21800.1|  416|Drosophila melanogaster homeodomain-co...    31   1.4  
BT029256-1|ABK30893.1|  416|Drosophila melanogaster FI01103p pro...    31   1.4  
AE013599-403|AAF59260.1|  416|Drosophila melanogaster CG11121-PA...    31   1.4  
BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p pro...    30   2.5  
AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA...    30   2.5  
BT006007-1|AAO74690.1|  528|Drosophila melanogaster RE18708p pro...    29   5.8  
AY060891-1|AAL28439.1|  528|Drosophila melanogaster GM04645p pro...    29   5.8  
AE014297-1243|AAF54591.1|  528|Drosophila melanogaster CG18578-P...    29   5.8  

>AY118958-1|AAM50818.1|  247|Drosophila melanogaster LD37839p
           protein.
          Length = 247

 Score =  322 bits (792), Expect = 2e-88
 Identities = 149/189 (78%), Positives = 169/189 (89%)
 Frame = +2

Query: 101 MPELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLR 280
           M ELL+DP+IR WVFLPIV+ITFLVGIVRHYVS+++S+QKK E+ Q+QDSQ MIRARLLR
Sbjct: 1   MTELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDSQAMIRARLLR 60

Query: 281 ENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMI 460
           ENGKYL  QSF+MR+++FNNEETGYFK QKRA  +QN      M+TDM+KGN  NVLPM+
Sbjct: 61  ENGKYLSAQSFSMRKNYFNNEETGYFKTQKRAPVAQN---SSAMLTDMVKGNFINVLPMV 117

Query: 461 VIGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTI 640
           VIGGWINWMFSGF+TTKVPFPLTLRFKPMLQRGVELA LDA+WVSSASWYFLNVFGLR+I
Sbjct: 118 VIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGVELASLDAAWVSSASWYFLNVFGLRSI 177

Query: 641 YALVLGENN 667
           Y LVLGENN
Sbjct: 178 YTLVLGENN 186


>AE014134-1941|AAF53000.1|  247|Drosophila melanogaster CG6750-PA
           protein.
          Length = 247

 Score =  322 bits (792), Expect = 2e-88
 Identities = 149/189 (78%), Positives = 169/189 (89%)
 Frame = +2

Query: 101 MPELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLR 280
           M ELL+DP+IR WVFLPIV+ITFLVGIVRHYVS+++S+QKK E+ Q+QDSQ MIRARLLR
Sbjct: 1   MTELLIDPDIRVWVFLPIVLITFLVGIVRHYVSILISTQKKAEITQIQDSQAMIRARLLR 60

Query: 281 ENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPMI 460
           ENGKYL  QSF+MR+++FNNEETGYFK QKRA  +QN      M+TDM+KGN  NVLPM+
Sbjct: 61  ENGKYLSAQSFSMRKNYFNNEETGYFKTQKRAPVAQN---SSAMLTDMVKGNFINVLPMV 117

Query: 461 VIGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRTI 640
           VIGGWINWMFSGF+TTKVPFPLTLRFKPMLQRGVELA LDA+WVSSASWYFLNVFGLR+I
Sbjct: 118 VIGGWINWMFSGFVTTKVPFPLTLRFKPMLQRGVELASLDAAWVSSASWYFLNVFGLRSI 177

Query: 641 YALVLGENN 667
           Y LVLGENN
Sbjct: 178 YTLVLGENN 186


>L31626-1|AAA21800.1|  416|Drosophila melanogaster
           homeodomain-containing protein protein.
          Length = 416

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +2

Query: 260 IRARLLRENGKYLPRQSFAMRRHWFNNEETGY-FKVQKRAAA----SQNPMTDPGMMTDM 424
           +R R L   GKY  R+ F + R  ++ EET Y FK + R+      S NP   P    D+
Sbjct: 192 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDL 251


>BT029256-1|ABK30893.1|  416|Drosophila melanogaster FI01103p
           protein.
          Length = 416

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +2

Query: 260 IRARLLRENGKYLPRQSFAMRRHWFNNEETGY-FKVQKRAAA----SQNPMTDPGMMTDM 424
           +R R L   GKY  R+ F + R  ++ EET Y FK + R+      S NP   P    D+
Sbjct: 192 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDL 251


>AE013599-403|AAF59260.1|  416|Drosophila melanogaster CG11121-PA
           protein.
          Length = 416

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +2

Query: 260 IRARLLRENGKYLPRQSFAMRRHWFNNEETGY-FKVQKRAAA----SQNPMTDPGMMTDM 424
           +R R L   GKY  R+ F + R  ++ EET Y FK + R+      S NP   P    D+
Sbjct: 192 LRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYSHNPYPSPREKRDL 251


>BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p
           protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 278 RENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNP 394
           R  G Y  RQ F  + H+ +NEET YF+    A     P
Sbjct: 296 RSGGNY--RQKFQQQSHYRHNEETVYFRSHNNAYHQPKP 332


>AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA
           protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 278 RENGKYLPRQSFAMRRHWFNNEETGYFKVQKRAAASQNP 394
           R  G Y  RQ F  + H+ +NEET YF+    A     P
Sbjct: 296 RSGGNY--RQKFQQQSHYRHNEETVYFRSHNNAYHQPKP 332


>BT006007-1|AAO74690.1|  528|Drosophila melanogaster RE18708p
           protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/61 (24%), Positives = 32/61 (52%)
 Frame = +2

Query: 197 SLILSSQKKIELIQVQDSQVMIRARLLRENGKYLPRQSFAMRRHWFNNEETGYFKVQKRA 376
           S +L    ++ L++   +Q  +    +  N  YLPRQ    R+++ NN++  ++ ++K  
Sbjct: 183 SALLKFSDRMSLVERVGNQAFLTYEYIFLNYFYLPRQEVLYRKYFPNNKQ-DFYDMRKNT 241

Query: 377 A 379
           A
Sbjct: 242 A 242


>AY060891-1|AAL28439.1|  528|Drosophila melanogaster GM04645p
           protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/61 (24%), Positives = 32/61 (52%)
 Frame = +2

Query: 197 SLILSSQKKIELIQVQDSQVMIRARLLRENGKYLPRQSFAMRRHWFNNEETGYFKVQKRA 376
           S +L    ++ L++   +Q  +    +  N  YLPRQ    R+++ NN++  ++ ++K  
Sbjct: 183 SALLKFSDRMSLVERVGNQAFLTYEYIFLNYFYLPRQEVLYRKYFPNNKQ-DFYDMRKNT 241

Query: 377 A 379
           A
Sbjct: 242 A 242


>AE014297-1243|AAF54591.1|  528|Drosophila melanogaster CG18578-PA
           protein.
          Length = 528

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 15/61 (24%), Positives = 32/61 (52%)
 Frame = +2

Query: 197 SLILSSQKKIELIQVQDSQVMIRARLLRENGKYLPRQSFAMRRHWFNNEETGYFKVQKRA 376
           S +L    ++ L++   +Q  +    +  N  YLPRQ    R+++ NN++  ++ ++K  
Sbjct: 183 SALLKFSDRMSLVERVGNQAFLTYEYIFLNYFYLPRQEVLYRKYFPNNKQ-DFYDMRKNT 241

Query: 377 A 379
           A
Sbjct: 242 A 242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,429,614
Number of Sequences: 53049
Number of extensions: 603481
Number of successful extensions: 1395
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)