Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt5d03
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical ... 274 4e-74
Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical pr... 31 0.75
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 31 0.75
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 31 0.75
AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein. 31 0.75
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 28 6.9
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 28 6.9
AF040657-5|AAB95052.1| 317|Caenorhabditis elegans Hypothetical ... 28 6.9
>AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical
protein Y62E10A.10 protein.
Length = 234
Score = 274 bits (672), Expect = 4e-74
Identities = 126/191 (65%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
Frame = +2
Query: 101 MPELLLDPNIRFWVFLPIVIITFLVGIVRHYVSLILSSQKKIELIQVQDSQVMIRARLLR 280
M +LLLDP IR WVFLPIV+ITF +GI+RHYVSL+L ++KK+EL + D Q ++RARLLR
Sbjct: 1 MTDLLLDPAIRTWVFLPIVVITFFIGILRHYVSLLLMNKKKVELENIADGQYLLRARLLR 60
Query: 281 ENGKYLPRQSFAMRRHWFNNEETGYF-KVQKRAAASQNPMTDPGMMTDMLKGNLTNVLPM 457
ENG++LP+ SF RR + EETGY K Q+R A NPM DP MT+MLKGN+ N++PM
Sbjct: 61 ENGRFLPKTSFNARRQYLCAEETGYLSKAQQRPAKGPNPM-DPSQMTEMLKGNMMNMIPM 119
Query: 458 IVIGGWINWMFSGFLTTKVPFPLTLRFKPMLQRGVELAYLDASWVSSASWYFLNVFGLRT 637
IV+GGWINW FSGF+TT+VPFPLTL+FK MLQRGV+L LD++WVSSASWYFL +FGLR+
Sbjct: 120 IVVGGWINWTFSGFVTTRVPFPLTLKFKAMLQRGVDLVSLDSAWVSSASWYFLCMFGLRS 179
Query: 638 IYALVLGENNA 670
IY LVLG NA
Sbjct: 180 IYTLVLGSENA 190
>Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical
protein C47E8.7 protein.
Length = 720
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 188 HYVSLILSSQKKIELIQVQDSQVMIRARLLRENGKYLPRQSFAMRRHWFNNEETGYFKVQ 367
HY + + +K EL+ V +++ A+L +NG+ L FA + W N E + K+Q
Sbjct: 612 HYFIVRFRNARKAELVAVAVNRL---AKLNMDNGESLKTWRFANMKKWHVNWEIRHLKIQ 668
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 31.1 bits (67), Expect = 0.75
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 188 HYVSLILSSQKKIELI-QVQDSQVMIRARLLRENGKYLPRQSFAMRRHWFNNEETGYFKV 364
H V L+++ Q + ++I + Q Q A+ LRE + R+ R+H ++ + +
Sbjct: 368 HQVQLMMAHQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALHQQQ 427
Query: 365 QKRAAASQNPMTDPGMMTDM 424
Q+ AAA+ N + +P MM M
Sbjct: 428 QQHAAAAANQL-NPAMMQMM 446
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective
protein 27,isoform b protein.
Length = 1124
Score = 31.1 bits (67), Expect = 0.75
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 188 HYVSLILSSQKKIELI-QVQDSQVMIRARLLRENGKYLPRQSFAMRRHWFNNEETGYFKV 364
H V L+++ Q + ++I + Q Q A+ LRE + R+ R+H ++ + +
Sbjct: 880 HQVQLMMAHQHQQKMIAEQQQQQRHAAAQQLREREQREQRERERERQHQQQAQQALHQQQ 939
Query: 365 QKRAAASQNPMTDPGMMTDM 424
Q+ AAA+ N + +P MM M
Sbjct: 940 QQHAAAAANQL-NPAMMQMM 958
>AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein.
Length = 720
Score = 31.1 bits (67), Expect = 0.75
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 188 HYVSLILSSQKKIELIQVQDSQVMIRARLLRENGKYLPRQSFAMRRHWFNNEETGYFKVQ 367
HY + + +K EL+ V +++ A+L +NG+ L FA + W N E + K+Q
Sbjct: 612 HYFIVRFRNARKAELVAVAVNRL---AKLNMDNGESLKTWRFANMKKWHVNWEIRHLKIQ 668
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 89 LLSQMPELLLDPNIRFWVFLPIV--IITFLVGIVRHYVSL 202
LL +P+LL P ++V PIV +I ++G++++Y L
Sbjct: 1177 LLHGLPKLLDSPKFGYYVVGPIVLFVIDRIIGLMQYYKKL 1216
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cuticle
protein 3 protein.
Length = 1497
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 89 LLSQMPELLLDPNIRFWVFLPIV--IITFLVGIVRHYVSL 202
LL +P+LL P ++V PIV +I ++G++++Y L
Sbjct: 1177 LLHGLPKLLDSPKFGYYVVGPIVLFVIDRIIGLMQYYKKL 1216
>AF040657-5|AAB95052.1| 317|Caenorhabditis elegans Hypothetical
protein T20H9.3 protein.
Length = 317
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +3
Query: 459 LSSEDGLTGCSVVFLQPKYLFR*LCDSSRCFSAALS*RIWMLHGCHQLHGISSM 620
L SE+GL V L ++ F L D CF A +W + Q I+S+
Sbjct: 113 LKSENGLPAKKVTLL--RFAFNDLFDILPCFDALEDIELWYISSIDQFQRIASL 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,433,786
Number of Sequences: 27780
Number of extensions: 317252
Number of successful extensions: 790
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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