Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5c18
         (539 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62961-1|AAB07366.1|  520|Homo sapiens succinyl CoA:3-oxoacid Co...   147   2e-35
CR457049-1|CAG33330.1|  520|Homo sapiens OXCT protein.                147   2e-35
BC009001-1|AAH09001.1|  520|Homo sapiens 3-oxoacid CoA transfera...   147   2e-35
AB029576-1|BAB13733.1|  520|Homo sapiens succinyl-CoA:3-ketoacid...   147   2e-35
BC072388-1|AAH72388.1|  259|Homo sapiens OXCT2 protein protein.       127   2e-29
AL033527-1|CAI19402.1|  517|Homo sapiens 3-oxoacid CoA transfera...   127   2e-29
AB050193-1|BAB40810.2|  517|Homo sapiens succinyl CoA: 3-oxo aci...   127   2e-29
EF095213-1|ABL01517.1|  150|Homo sapiens succinyl-CoA:3-ketoacid...    90   5e-18

>U62961-1|AAB07366.1|  520|Homo sapiens succinyl CoA:3-oxoacid CoA
           transferase precursor protein.
          Length = 520

 Score =  147 bits (357), Expect = 2e-35
 Identities = 71/106 (66%), Positives = 84/106 (79%)
 Frame = +3

Query: 222 CATYATIIRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSALTVVS 401
           C+   +  R +K Y    E V+D+ DG+ +LVGGFGLCGIPENLI AL    V  LT VS
Sbjct: 30  CSFSTSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVS 89

Query: 402 NNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVEL 539
           NNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVEL
Sbjct: 90  NNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVEL 135


>CR457049-1|CAG33330.1|  520|Homo sapiens OXCT protein.
          Length = 520

 Score =  147 bits (357), Expect = 2e-35
 Identities = 71/106 (66%), Positives = 84/106 (79%)
 Frame = +3

Query: 222 CATYATIIRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSALTVVS 401
           C+   +  R +K Y    E V+D+ DG+ +LVGGFGLCGIPENLI AL    V  LT VS
Sbjct: 30  CSFSTSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVS 89

Query: 402 NNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVEL 539
           NNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVEL
Sbjct: 90  NNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVEL 135


>BC009001-1|AAH09001.1|  520|Homo sapiens 3-oxoacid CoA transferase
           1 protein.
          Length = 520

 Score =  147 bits (357), Expect = 2e-35
 Identities = 71/106 (66%), Positives = 84/106 (79%)
 Frame = +3

Query: 222 CATYATIIRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSALTVVS 401
           C+   +  R +K Y    E V+D+ DG+ +LVGGFGLCGIPENLI AL    V  LT VS
Sbjct: 30  CSFSTSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVS 89

Query: 402 NNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVEL 539
           NNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVEL
Sbjct: 90  NNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVEL 135


>AB029576-1|BAB13733.1|  520|Homo sapiens succinyl-CoA:3-ketoacid
           CoA transferase protein.
          Length = 520

 Score =  147 bits (357), Expect = 2e-35
 Identities = 71/106 (66%), Positives = 84/106 (79%)
 Frame = +3

Query: 222 CATYATIIRKSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSALTVVS 401
           C+   +  R +K Y    E V+D+ DG+ +LVGGFGLCGIPENLI AL    V  LT VS
Sbjct: 30  CSFSTSAHRHTKFYTDPVEAVKDIPDGATVLVGGFGLCGIPENLIDALLKTGVKGLTAVS 89

Query: 402 NNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVEL 539
           NNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVEL
Sbjct: 90  NNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVEL 135


>BC072388-1|AAH72388.1|  259|Homo sapiens OXCT2 protein protein.
          Length = 259

 Score =  127 bits (307), Expect = 2e-29
 Identities = 62/110 (56%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
 Frame = +3

Query: 216 KSCAT-YATIIR-KSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSAL 389
           + CA  +AT  R ++K YA   E+V+D+SDG+ +++GGFGLCGIPENLI AL   +V  L
Sbjct: 26  QGCARCFATSPRPRAKFYADPVEMVKDISDGATVMIGGFGLCGIPENLIAALLRTRVKDL 85

Query: 390 TVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVEL 539
            VVS+N GVEDFGLG+LL ++Q++R++ SYVGEN   E Q+L+GELE+EL
Sbjct: 86  QVVSSNVGVEDFGLGLLLAARQVRRIVCSYVGENTLCESQYLAGELELEL 135


>AL033527-1|CAI19402.1|  517|Homo sapiens 3-oxoacid CoA transferase
           2 protein.
          Length = 517

 Score =  127 bits (307), Expect = 2e-29
 Identities = 62/110 (56%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
 Frame = +3

Query: 216 KSCAT-YATIIR-KSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSAL 389
           + CA  +AT  R ++K YA   E+V+D+SDG+ +++GGFGLCGIPENLI AL   +V  L
Sbjct: 26  QGCARCFATSPRLRAKFYADPVEMVKDISDGATVMIGGFGLCGIPENLIAALLRTRVKDL 85

Query: 390 TVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVEL 539
            VVS+N GVEDFGLG+LL ++Q++R++ SYVGEN   E Q+L+GELE+EL
Sbjct: 86  QVVSSNVGVEDFGLGLLLAARQVRRIVCSYVGENTLCESQYLAGELELEL 135


>AB050193-1|BAB40810.2|  517|Homo sapiens succinyl CoA: 3-oxo acid
           CoA transferase protein.
          Length = 517

 Score =  127 bits (307), Expect = 2e-29
 Identities = 62/110 (56%), Positives = 85/110 (77%), Gaps = 2/110 (1%)
 Frame = +3

Query: 216 KSCAT-YATIIR-KSKIYASAQEVVQDVSDGSKLLVGGFGLCGIPENLIKALNIKKVSAL 389
           + CA  +AT  R ++K YA   E+V+D+SDG+ +++GGFGLCGIPENLI AL   +V  L
Sbjct: 26  QGCARCFATSPRLRAKFYADPVEMVKDISDGATVMIGGFGLCGIPENLIAALLRTRVKDL 85

Query: 390 TVVSNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVEL 539
            VVS+N GVEDFGLG+LL ++Q++R++ SYVGEN   E Q+L+GELE+EL
Sbjct: 86  QVVSSNVGVEDFGLGLLLAARQVRRIVCSYVGENTLCESQYLAGELELEL 135


>EF095213-1|ABL01517.1|  150|Homo sapiens succinyl-CoA:3-ketoacid
           CoA transferase protein.
          Length = 150

 Score = 89.8 bits (213), Expect = 5e-18
 Identities = 41/47 (87%), Positives = 47/47 (100%)
 Frame = +3

Query: 399 SNNAGVEDFGLGILLKSKQIKRMISSYVGENAEFERQFLSGELEVEL 539
           SNNAGV++FGLG+LL+SKQIKRM+SSYVGENAEFERQ+LSGELEVEL
Sbjct: 1   SNNAGVDNFGLGLLLRSKQIKRMVSSYVGENAEFERQYLSGELEVEL 47


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,308,986
Number of Sequences: 237096
Number of extensions: 1073308
Number of successful extensions: 6063
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6063
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)