Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5c13
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058687-1|AAL13916.1|  219|Drosophila melanogaster LD40766p pro...   107   9e-24
AE014297-4427|AAF56929.1|  219|Drosophila melanogaster CG1969-PA...   107   9e-24
AE014297-4426|AAN14182.1|  215|Drosophila melanogaster CG1969-PB...   107   9e-24
AY119610-1|AAM50264.1|  825|Drosophila melanogaster LD34829p pro...    30   2.8  
AY058375-1|AAL13604.1|  897|Drosophila melanogaster GH14288p pro...    30   2.8  
AE013599-2414|AAM68495.2|  810|Drosophila melanogaster CG6967-PB...    30   2.8  
AE013599-2413|AAF57908.2|  825|Drosophila melanogaster CG6967-PA...    30   2.8  
AE013599-1191|AAF58736.3|  897|Drosophila melanogaster CG11919-P...    30   2.8  

>AY058687-1|AAL13916.1|  219|Drosophila melanogaster LD40766p
           protein.
          Length = 219

 Score =  107 bits (258), Expect = 9e-24
 Identities = 49/77 (63%), Positives = 60/77 (77%)
 Frame = +3

Query: 345 YLYPPEILKRLDFSKSPAKFHPKISAVDPGEDWMIVRPLQRSDYDKGFLQLLSQLTSVGN 524
           YLY P +L +LDF +SPA F P ISA +PGE WM VRPL+ +DYD+GFLQLLSQLT VGN
Sbjct: 9   YLYDPNLLLKLDFHRSPANFKPFISAANPGEPWMKVRPLKDTDYDRGFLQLLSQLTHVGN 68

Query: 525 ITRKQYDDRFTKMKHSG 575
           + R Q+  RF++MK SG
Sbjct: 69  VNRTQFLTRFSQMKASG 85


>AE014297-4427|AAF56929.1|  219|Drosophila melanogaster CG1969-PA,
           isoform A protein.
          Length = 219

 Score =  107 bits (258), Expect = 9e-24
 Identities = 49/77 (63%), Positives = 60/77 (77%)
 Frame = +3

Query: 345 YLYPPEILKRLDFSKSPAKFHPKISAVDPGEDWMIVRPLQRSDYDKGFLQLLSQLTSVGN 524
           YLY P +L +LDF +SPA F P ISA +PGE WM VRPL+ +DYD+GFLQLLSQLT VGN
Sbjct: 9   YLYDPNLLLKLDFHRSPANFKPFISAANPGEPWMKVRPLKDTDYDRGFLQLLSQLTHVGN 68

Query: 525 ITRKQYDDRFTKMKHSG 575
           + R Q+  RF++MK SG
Sbjct: 69  VNRTQFLTRFSQMKASG 85


>AE014297-4426|AAN14182.1|  215|Drosophila melanogaster CG1969-PB,
           isoform B protein.
          Length = 215

 Score =  107 bits (258), Expect = 9e-24
 Identities = 49/77 (63%), Positives = 60/77 (77%)
 Frame = +3

Query: 345 YLYPPEILKRLDFSKSPAKFHPKISAVDPGEDWMIVRPLQRSDYDKGFLQLLSQLTSVGN 524
           YLY P +L +LDF +SPA F P ISA +PGE WM VRPL+ +DYD+GFLQLLSQLT VGN
Sbjct: 5   YLYDPNLLLKLDFHRSPANFKPFISAANPGEPWMKVRPLKDTDYDRGFLQLLSQLTHVGN 64

Query: 525 ITRKQYDDRFTKMKHSG 575
           + R Q+  RF++MK SG
Sbjct: 65  VNRTQFLTRFSQMKASG 81


>AY119610-1|AAM50264.1|  825|Drosophila melanogaster LD34829p
           protein.
          Length = 825

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 429 PGEDWMIVRPLQRSDYDKGFLQLLSQLTSVGNITRKQYD 545
           P  D  ++R   RS Y+KGF  + S L    N ++  YD
Sbjct: 399 PEPDHQLIRVYSRSIYEKGFASVPSLLLKNSNCSKSIYD 437


>AY058375-1|AAL13604.1|  897|Drosophila melanogaster GH14288p
           protein.
          Length = 897

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +3

Query: 315 NGNAEGKLSEYLYPPE--ILKRLDFSKSPAKFHPKISAVD 428
           +G+  G +SE    PE  I++  DF+KS  KF P ISA D
Sbjct: 845 DGHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSISAKD 884


>AE013599-2414|AAM68495.2|  810|Drosophila melanogaster CG6967-PB,
           isoform B protein.
          Length = 810

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 429 PGEDWMIVRPLQRSDYDKGFLQLLSQLTSVGNITRKQYD 545
           P  D  ++R   RS Y+KGF  + S L    N ++  YD
Sbjct: 384 PEPDHQLIRVYSRSIYEKGFASVPSLLLKNSNCSKSIYD 422


>AE013599-2413|AAF57908.2|  825|Drosophila melanogaster CG6967-PA,
           isoform A protein.
          Length = 825

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 429 PGEDWMIVRPLQRSDYDKGFLQLLSQLTSVGNITRKQYD 545
           P  D  ++R   RS Y+KGF  + S L    N ++  YD
Sbjct: 399 PEPDHQLIRVYSRSIYEKGFASVPSLLLKNSNCSKSIYD 437


>AE013599-1191|AAF58736.3|  897|Drosophila melanogaster CG11919-PA,
           isoform A protein.
          Length = 897

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +3

Query: 315 NGNAEGKLSEYLYPPE--ILKRLDFSKSPAKFHPKISAVD 428
           +G+  G +SE    PE  I++  DF+KS  KF P ISA D
Sbjct: 845 DGHLSGTISEKELVPENVIVQEEDFTKSFNKFVPSISAKD 884


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,581,813
Number of Sequences: 53049
Number of extensions: 502305
Number of successful extensions: 1230
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)