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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt5c12
         (592 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical pr...    97   6e-21
U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation fact...    60   2e-09
U51994-8|AAO21382.1|   77|Caenorhabditis elegans Elongation fact...    60   2e-09
U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation fact...    60   2e-09
U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation fact...    60   2e-09
U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation fact...    60   2e-09
Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical pr...    53   1e-07
Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical pr...    53   1e-07
D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation fact...    33   0.11 
D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation fact...    33   0.11 
AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongatio...    33   0.11 
AC006714-2|AAK29716.2|  689|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical pr...    28   4.3  
Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy...    28   4.3  
AF024497-5|AAO21477.1|  871|Caenorhabditis elegans Defective in ...    28   4.3  
AF024497-4|AAO21479.1|  807|Caenorhabditis elegans Defective in ...    28   4.3  
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ...    28   4.3  
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ...    28   4.3  
AC025716-9|AAK39619.1|  469|Caenorhabditis elegans Hypothetical ...    28   4.3  
Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation f...    28   5.7  
U55367-2|AAA97988.2|  356|Caenorhabditis elegans G protein, alph...    28   5.7  
M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation fact...    28   5.7  
L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AY008132-1|AAG32085.1|  356|Caenorhabditis elegans heterotrimeri...    28   5.7  
AC006695-8|AAF39976.1|  351|Caenorhabditis elegans Hypothetical ...    28   5.7  
AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial...    28   5.7  
Z95621-2|CAB09131.1|  330|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z78019-9|CAB01457.1|  330|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical pr...    27   10.0 
L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding pro...    27   10.0 
AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditi...    27   10.0 

>Z92835-1|CAB07395.2|  532|Caenorhabditis elegans Hypothetical
           protein H19N07.1 protein.
          Length = 532

 Score = 97.5 bits (232), Expect = 6e-21
 Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
 Frame = +3

Query: 348 TQVGNTNPNEDGELTKKIPKKKPPRVE-DTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLT 524
           T+     P  + +L   + KK    V  D  + KEH+N+VF+GHVDAGKSTIGGQ+M LT
Sbjct: 74  TEAPKKEPTPEEDLVAPLAKKFQRTVYVDDGTHKEHINMVFVGHVDAGKSTIGGQLMFLT 133

Query: 525 GMVDXRTLEKYEREAREKSRES 590
           GMVD RTLEKYEREA+EK RES
Sbjct: 134 GMVDKRTLEKYEREAKEKGRES 155


>U51994-9|AAO21383.1|  267|Caenorhabditis elegans Elongation factor
           protein 4, isoformc protein.
          Length = 267

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 37/50 (74%)
 Frame = +3

Query: 441 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYEREAREKSRES 590
           +K H+N+V IGHVD+GKST  G ++   G +D RT+EK+E+EA+E  + S
Sbjct: 4   EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53


>U51994-8|AAO21382.1|   77|Caenorhabditis elegans Elongation factor
           protein 4, isoformb protein.
          Length = 77

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 37/50 (74%)
 Frame = +3

Query: 441 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYEREAREKSRES 590
           +K H+N+V IGHVD+GKST  G ++   G +D RT+EK+E+EA+E  + S
Sbjct: 4   EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53


>U51994-7|AAO21384.1|  429|Caenorhabditis elegans Elongation factor
           protein 4, isoformd protein.
          Length = 429

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 37/50 (74%)
 Frame = +3

Query: 441 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYEREAREKSRES 590
           +K H+N+V IGHVD+GKST  G ++   G +D RT+EK+E+EA+E  + S
Sbjct: 4   EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53


>U51994-6|AAA96068.1|  463|Caenorhabditis elegans Elongation factor
           protein 4, isoforma protein.
          Length = 463

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 37/50 (74%)
 Frame = +3

Query: 441 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYEREAREKSRES 590
           +K H+N+V IGHVD+GKST  G ++   G +D RT+EK+E+EA+E  + S
Sbjct: 4   EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53


>U40935-2|AAA81688.1|  463|Caenorhabditis elegans Elongation factor
           protein 3 protein.
          Length = 463

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 25/50 (50%), Positives = 37/50 (74%)
 Frame = +3

Query: 441 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYEREAREKSRES 590
           +K H+N+V IGHVD+GKST  G ++   G +D RT+EK+E+EA+E  + S
Sbjct: 4   EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGS 53


>Z81098-7|CAI79193.2|  592|Caenorhabditis elegans Hypothetical
           protein K07A12.4b protein.
          Length = 592

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +3

Query: 399 IPKKKP-PRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYEREARE 575
           + +K P PRV D    K+ +N++ +GHVDAGKST+ G ++    +VD RT++K++ EA  
Sbjct: 156 VARKTPKPRVAD----KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAAR 211

Query: 576 KSRES 590
             + S
Sbjct: 212 NGKAS 216


>Z81098-6|CAB03180.3|  610|Caenorhabditis elegans Hypothetical
           protein K07A12.4a protein.
          Length = 610

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +3

Query: 399 IPKKKP-PRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYEREARE 575
           + +K P PRV D    K+ +N++ +GHVDAGKST+ G ++    +VD RT++K++ EA  
Sbjct: 174 VARKTPKPRVAD----KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAAR 229

Query: 576 KSRES 590
             + S
Sbjct: 230 NGKAS 234


>D38472-1|BAA07492.1|  495|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 495

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 444 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYE 560
           K H+NV  IGHVD GK+T+   I  +          KYE
Sbjct: 47  KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 85


>D38471-1|BAA07491.1|  496|Caenorhabditis elegans elongation factor
           Tu homologueprecursor protein.
          Length = 496

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 444 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYE 560
           K H+NV  IGHVD GK+T+   I  +          KYE
Sbjct: 48  KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86


>AC024859-25|AAK29979.1|  496|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 1 protein.
          Length = 496

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 444 KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYE 560
           K H+NV  IGHVD GK+T+   I  +          KYE
Sbjct: 48  KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYE 86


>AC006714-2|AAK29716.2|  689|Caenorhabditis elegans Hypothetical
           protein Y119D3B.14 protein.
          Length = 689

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 456 NVVFIGHVDAGKSTIGGQIMSLTGMV 533
           N+  I HVDAGK+T+  +++ L G +
Sbjct: 27  NIGVIAHVDAGKTTVTERLLYLAGAI 52


>Z83235-9|CAI79209.1|  705|Caenorhabditis elegans Hypothetical
           protein K10C3.5b protein.
          Length = 705

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 447 EHV-NVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEK 554
           EH+ NV  + HVD GK++    ++S   ++  R   K
Sbjct: 18  EHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGK 54


>Z83235-8|CAB05774.2|  894|Caenorhabditis elegans Hypothetical
           protein K10C3.5a protein.
          Length = 894

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 447 EHV-NVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEK 554
           EH+ NV  + HVD GK++    ++S   ++  R   K
Sbjct: 18  EHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGK 54


>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
            cytoplasmic polyA polymeraseprotein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 342  LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 446
            +D +  N+N  +DG  TK+ P  + P    T+S+K
Sbjct: 1069 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 1103


>AF024497-5|AAO21477.1|  871|Caenorhabditis elegans Defective in
           germ line developmentprotein 2, isoform b protein.
          Length = 871

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 342 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 446
           +D +  N+N  +DG  TK+ P  + P    T+S+K
Sbjct: 827 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 861


>AF024497-4|AAO21479.1|  807|Caenorhabditis elegans Defective in
           germ line developmentprotein 2, isoform d protein.
          Length = 807

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 342 LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 446
           +D +  N+N  +DG  TK+ P  + P    T+S+K
Sbjct: 763 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 797


>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in germ
            line developmentprotein 2, isoform c protein.
          Length = 1036

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 342  LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 446
            +D +  N+N  +DG  TK+ P  + P    T+S+K
Sbjct: 992  VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 1026


>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in germ
            line developmentprotein 2, isoform a protein.
          Length = 1113

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 342  LDTQVGNTNPNEDGELTKKIPKKKPPRVEDTRSKK 446
            +D +  N+N  +DG  TK+ P  + P    T+S+K
Sbjct: 1069 VDKKQQNSNRKDDGNRTKRSPMVQSPEPAKTKSEK 1103


>AC025716-9|AAK39619.1|  469|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.8 protein.
          Length = 469

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 417 PRVEDTRSKKEHVNVVFIGHVDAGKSTI 500
           P  E+  S++  +N+  IGHV  GKST+
Sbjct: 29  PLTEEVISRQATINIGTIGHVAHGKSTL 56


>Z81068-5|CAB02985.1|  852|Caenorhabditis elegans Hypothetical
           protein F25H5.4 protein.
          Length = 852

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 441 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMV 533
           K+   N+  I HVD GKST+   ++S  G++
Sbjct: 16  KRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 46


>U80437-9|AAN84843.1|  439|Caenorhabditis elegans Tu elongation
           factor (ef-tu), mitochondrialprotein 2 protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +3

Query: 444 KEHVNVVFIGHVDAGKSTIGG---QIMSLTGMVDXRTLEKYEREAREKSR 584
           K +VNV  IGH+D GK+T+     ++ +  G       ++ ++   EK R
Sbjct: 43  KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKR 92


>U55367-2|AAA97988.2|  356|Caenorhabditis elegans G protein, alpha
           subunit protein 10 protein.
          Length = 356

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +3

Query: 384 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTG 527
           E+ K++ KKK  ++E T        V+ +G  ++GKST+  Q+ ++TG
Sbjct: 22  EIEKQLEKKKNMQLEQT--------VLLLGPGESGKSTVMKQMRAMTG 61


>M86959-1|AAD03339.1|  852|Caenorhabditis elegans elongation factor
           protein.
          Length = 852

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 441 KKEHVNVVFIGHVDAGKSTIGGQIMSLTGMV 533
           K+   N+  I HVD GKST+   ++S  G++
Sbjct: 16  KRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 46


>L13200-4|AAA28191.2|  645|Caenorhabditis elegans Hypothetical
           protein ZK1236.1 protein.
          Length = 645

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +3

Query: 456 NVVFIGHVDAGKSTIGGQIMSLTGMVDXRTLEKYEREAREKSR 584
           N   + HVD GKST+  +++ + G V     +  ++   E+ R
Sbjct: 44  NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERER 86


>AY008132-1|AAG32085.1|  356|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 356

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 16/48 (33%), Positives = 29/48 (60%)
 Frame = +3

Query: 384 ELTKKIPKKKPPRVEDTRSKKEHVNVVFIGHVDAGKSTIGGQIMSLTG 527
           E+ K++ KKK  ++E T        V+ +G  ++GKST+  Q+ ++TG
Sbjct: 22  EIEKQLEKKKNMQLEQT--------VLLLGPGESGKSTVMKQMRAMTG 61


>AC006695-8|AAF39976.1|  351|Caenorhabditis elegans Hypothetical
           protein W06H8.4 protein.
          Length = 351

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 500 NSRLSCIYMSYKYYIYMFFFASCIF 426
           N  L  +Y+SY + ++ F FAS +F
Sbjct: 223 NPELCSVYLSYYHVVFSFTFASLLF 247


>AB010028-1|BAA31345.1|  439|Caenorhabditis elegans mitochondrial
           elongation factorTu homologue protein.
          Length = 439

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +3

Query: 444 KEHVNVVFIGHVDAGKSTIGG---QIMSLTGMVDXRTLEKYEREAREKSR 584
           K +VNV  IGH+D GK+T+     ++ +  G       ++ ++   EK R
Sbjct: 43  KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHIKFDEIDKGKEEKKR 92


>Z95621-2|CAB09131.1|  330|Caenorhabditis elegans Hypothetical
           protein ZK863.2 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 253 SGGTDAVVGGGSSTRGEADA 194
           SGG+D+ VGGG  T    D+
Sbjct: 256 SGGSDSAVGGGGDTNASTDS 275


>Z78019-9|CAB01457.1|  330|Caenorhabditis elegans Hypothetical
           protein ZK863.2 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 253 SGGTDAVVGGGSSTRGEADA 194
           SGG+D+ VGGG  T    D+
Sbjct: 256 SGGSDSAVGGGGDTNASTDS 275


>Z99709-7|CAB16862.2|  500|Caenorhabditis elegans Hypothetical
           protein C47B2.7b protein.
          Length = 500

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 432 TRSKKEHVNVVFIGHVDAGKSTIGGQIMSL 521
           T S    +N+  +GHVD+GK+T+  +I  L
Sbjct: 7   TSSSVGPLNLGILGHVDSGKTTLTRRIAEL 36


>Z99709-6|CAB16863.1|  459|Caenorhabditis elegans Hypothetical
           protein C47B2.7a protein.
          Length = 459

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 432 TRSKKEHVNVVFIGHVDAGKSTIGGQIMSL 521
           T S    +N+  +GHVD+GK+T+  +I  L
Sbjct: 7   TSSSVGPLNLGILGHVDSGKTTLTRRIAEL 36


>L40996-1|AAA86431.1|  593|Caenorhabditis elegans GTP-binding
           protein protein.
          Length = 593

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = +3

Query: 423 VEDTRSKKEHVN--VVFIGHVDAGKSTIGGQIMSLTGMVDXR 542
           + D  ++K+ +   V  +G+VDAGKST+ G +++ + + D R
Sbjct: 129 IRDPPTEKDFIEARVAVVGNVDAGKSTLLG-VLTHSALDDGR 169


>AF125969-2|AAD14761.1|  613|Caenorhabditis elegans Caenorhabditis
           gtp-binding proteinprotein 1 protein.
          Length = 613

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = +3

Query: 423 VEDTRSKKEHVN--VVFIGHVDAGKSTIGGQIMSLTGMVDXR 542
           + D  ++K+ +   V  +G+VDAGKST+ G +++ + + D R
Sbjct: 129 IRDPPTEKDFIEARVAVVGNVDAGKSTLLG-VLTHSALDDGR 169


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,714,191
Number of Sequences: 27780
Number of extensions: 183118
Number of successful extensions: 854
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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